Synechococcus sp. WH 8103: SynWH8103_01147
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Entry
SynWH8103_01147 CDS
T04859
Name
(GenBank) exonuclease family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw03030
DNA replication
synw03430
Mismatch repair
synw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SynWH8103_01147
03430 Mismatch repair
SynWH8103_01147
03440 Homologous recombination
SynWH8103_01147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synw03032
]
SynWH8103_01147
03400 DNA repair and recombination proteins [BR:
synw03400
]
SynWH8103_01147
Enzymes [BR:
synw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SynWH8103_01147
DNA replication proteins [BR:
synw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SynWH8103_01147
DNA repair and recombination proteins [BR:
synw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SynWH8103_01147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CRY91881
LinkDB
All DBs
Position
1017560..1018330
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AA seq
256 aa
AA seq
DB search
MADQLTLLEAVPEHRSEPTASAGPATLLIIDTETTGLDPEKDRCLEVGAILFDVSTRSVL
AQQSFLLPVETNAAEPINRIPASVTRLPQPWTGALRWFDELLTASDVLVAHNAVFDRQWF
GRDPLPAVSHPWLCSMEDLRWPAELQLRSRPSVRDLALAYGVPVWSAHRALTDCNYLSEV
FARCDDLETMLLHGLEPRQLMRARVSYDDRHLAREAGFRWNDPVKGAWTRRLSQREVKSL
DFPVEVVEPGPERRAA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggctgatcagttgacgttgttagaagcggtgccggagcaccgttctgagccgacggct
tcggcaggtcctgccacgcttctgatcattgacaccgagaccacagggctggatccggag
aaggatcgctgcctcgaagttggcgccattttgtttgatgtgtcgacacgatccgtgttg
gcacagcagtcctttctgttgccggtggagaccaatgcggcggaaccgatcaaccggatc
cccgcgtcggtcacacggttgccccagccctggactggtgcactgcgctggtttgatgaa
ctcctcaccgcctcggacgtgctggtggcccataacgccgtcttcgatcgtcagtggttt
ggtcgggatcccttgcctgccgtcagccatccatggctttgttcgatggaggatctgcgc
tggcctgctgagctgcagttgcggtcccgtccctccgtgcgggacctggctctcgcctac
ggcgttccggtctggtcagcccatcgggcgttgaccgattgcaactacctctcggaggtg
ttcgcccgttgcgacgacctggagacgatgctgctgcacggccttgagccccgtcagttg
atgcgagcaagggtgtcgtacgacgaccgccatctcgcccgggaggcaggattccgatgg
aacgatcctgtgaaaggggcctggacgcgccgcctgagccaacgggaggtcaagagcctc
gattttcctgttgaggtcgttgaacctggtccggaacgccgcgctgcctga
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