KEGG   Synechococcus sp. WH 8103: SynWH8103_01246
Entry
SynWH8103_01246   CDS       T04859                                 
Symbol
lptB
Name
(GenBank) lipopolysaccharide export system ATP-binding protein LptB
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
synw  Synechococcus sp. WH 8103
Pathway
synw02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:synw00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    SynWH8103_01246 (lptB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:synw02000]
    SynWH8103_01246 (lptB)
Enzymes [BR:synw01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     SynWH8103_01246 (lptB)
Transporters [BR:synw02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    SynWH8103_01246 (lptB)
 Other transporters
  Pores ion channels [TC:1]
   SynWH8103_01246 (lptB)
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N BCA_ABC_TP_C SbcC_Walker_B AAA_23 MukB AAA_29 DO-GTPase2
Other DBs
NCBI-ProteinID: CRY91977
LinkDB
Position
1096935..1097663
AA seq 242 aa
MSLSLDTVSISLGGRQLVNRVSLDLSAGEVVGLLGPNGAGKTTTFNLVIGLLRPDAGVIS
LDGQVVSTLSMPKRARLGLGYLPQEPSVFRQLTVRQNLEIALDQTDLSPQHRRDRRDQLI
EDFHLVAFVDRCGYQLSGGERRRCEVARALAVGAEGPRYLLLDEPFAGVDPLAVADLQDL
IQALRSRGMGILVTDHNVRETLAITDRAYILNDGAILASGQSQTVADDPLVRRYYLGEAF
QL
NT seq 729 nt   +upstreamnt  +downstreamnt
atgagcctctcgctggacacggtgtccatcagcctcggcggccggcagttggtcaaccgg
gtaagcctcgatctgtcggccggtgaggtggtcggtctgctggggcccaacggtgctggt
aagaccaccacgttcaatctggtgatcgggttgctgcgccctgatgccggagtgatcagc
ctggatggtcaggtggtgtcgaccctgtcgatgccgaaacgggctcggcttggactcggt
tatctgccgcaggagcccagtgtctttcgtcagttgacggttcgccagaatctcgaaatt
gctcttgaccagacggatctcagtccgcaacaccgtcgtgatcgccgcgaccagttgatc
gaggactttcatctcgtggcgtttgttgaccgttgcggttatcagctttcaggtggtgag
cgacgccgctgtgaagtggcccgggccctggctgttggagcggaaggcccccgctacctg
ctcctggatgaacccttcgcaggggtggatccccttgcggtggctgatctccaggacctg
atccaggcgctgcgctctcgggggatggggatcctggtgaccgatcacaacgtccgggaa
accctggcgatcacggatcgcgcgtacatcctcaacgacggcgcgattctggccagcggt
caatcccagaccgtggccgatgaccctctggtgcgtcgctactacctcggggaggccttc
cagctgtga

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