Synechococcus sp. WH 8103: SynWH8103_01361
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Entry
SynWH8103_01361 CDS
T04859
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
synw03009
]
SynWH8103_01361 (rumA)
Enzymes [BR:
synw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SynWH8103_01361 (rumA)
Ribosome biogenesis [BR:
synw03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SynWH8103_01361 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRM5-TYW2_MTfase
UPF0020
Methyltransf_11
Methyltransf_12
Methyltransf_32
TPMT
Cons_hypoth95
N6_N4_Mtase
Motif
Other DBs
NCBI-ProteinID:
CRY92090
LinkDB
All DBs
Position
complement(1189086..1190483)
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AA seq
465 aa
AA seq
DB search
MPETNGTEADSSGPRPGLRLELQAIDLDRDGHGLARWQGWVVVVPGLLPGERAKVQLQQR
QKSRWLSRISERLDSSPTRRRPPCILAQDCGGCTLQHLEESAQRNWKQDQLHQTMLRLGG
IDHPQAPALTDQRGLGYRNRGLIPLRRGEDDRLRMGYFRRGSHRIVNLSRCPVLDPRLDA
LVEPLKQDLDTSSLSADHDLSQSQGLRHLGLRIGHHTGEVLITVVSSQQLPALQRLAQQW
IERWDPVKGVTLNLQPRRTNQILGATTTVLAGAPTIRELFCGLQLQLSTTTFFQINTPQA
ERIVACIVSWLSQAELAGPIVDAYCGIGTISLPLAAQGHHVVGLEINPDSIDQARSNADA
NGLGARTEFQAGDVANLLKETLATCSALVVDPPRRGLESSVIEAILSDPPGLLAYLSCDM
ATQARDLKRLLQPEGPYRLEQLQPVDFFPQTTHLENLAFLRRVSS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagaccaacggcaccgaggctgattcgagcgggccaaggccaggtcttcgcctg
gaattgcaggccatcgatctggatcgggatggccacggtctggcccgttggcaggggtgg
gtggtggtggtgccgggtctactaccgggcgaacgggcgaaggtgcagcttcaacagcgg
cagaagtcgcgatggctgagtcgcatcagtgaacgactggacagctcgccgacccgccga
cggcctccttgcatccttgctcaggattgcggtggctgcactctgcagcaccttgaggag
tcagcccagcggaattggaagcaggatcagctccaccagacgatgctgcggctcgggggc
atcgaccatccccaagctcctgccctcacggatcagcgtggcctcggctatcgcaaccgc
gggttgattcccctgcgtcgtggagaggacgaccgcctacgcatgggctacttccgtcgc
ggcagccatcgcatcgtcaatctctcccgctgtccagtgctggatccacgcctggatgct
ctggtcgaaccgctcaagcaggatctggataccagtagcctcagcgccgatcacgatctc
agccagtcccagggacttcgccaccttggtctacggatcggacaccacaccggcgaggtc
ttgatcactgtggtgagcagtcagcagctgcctgccttgcaacggctggcccagcaatgg
atcgagcgctgggacccggtcaagggagtcaccctgaatcttcagccccgccggaccaac
cagatcctgggagcaacaaccactgttctggcgggtgcccccacgattcgagaactgttc
tgtggactgcagcttcagctcagcaccaccaccttttttcagatcaacacgccccaggcg
gaacgcatcgtggcgtgcatcgtgagctggctgagtcaggcggagctcgcaggcccaatc
gtcgacgcctactgcggcatcggcaccatcagcttgcctctggctgcacagggtcatcac
gtcgtgggccttgagatcaaccccgactccatcgatcaagctcgcagcaatgccgatgcc
aacggtctgggggcgcggaccgagttccaggccggtgatgtggccaatttgcttaaggaa
acgctggcgacatgttcagcactggtggtcgatccaccacggcgaggtcttgagagcagc
gtgattgaggcaatcctgagtgatccaccaggcctgttggcctacctcagttgcgacatg
gcaacccaggccagggatctgaaacggttgctccaaccggagggcccttaccggttggag
cagctccagccggttgatttctttccccagaccacccatctggagaatctggcgtttctg
cgccgagtcagctcctga
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