Synechococcus sp. WH 8103: SynWH8103_01368
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Entry
SynWH8103_01368 CDS
T04859
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K03090
RNA polymerase sigma-B factor
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synw03021
]
SynWH8103_01368
Transcription machinery [BR:
synw03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SynWH8103_01368
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
HTH_50
Sigma70_r4_2
HTH_AsnC-type
HTH_38
Motif
Other DBs
NCBI-ProteinID:
CRY92097
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Position
complement(1194562..1195218)
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AA seq
218 aa
AA seq
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MQCPDIHLFMSNTTVQRRNQQVERHLYLAERLARSFSQRTGLDHDDLYQVAVLGLIKATK
AYRSETNVPFEAFARVHARGAILHYLRDSVALVRLPRRIEEEAQRLSQIHQPKNSREEWV
QALYRSKNRWLPCPEEQQAQSNSGITMMVNAERRDAIQLAFSQLGDAEKHAVKAVVIDDR
CLRNVGTSLGVSAMTVQRRVKKGLKQLKLRLGSLQTAH
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgtcccgacattcatttgttcatgtccaacaccacagttcaacggcgcaaccaa
caagttgagcgccacctttacctcgccgaacggcttgccaggagcttttctcaacgaaca
ggtctcgaccatgacgacctctatcaggtggcggtccttggtctgatcaaggcgaccaag
gcatatcgaagcgaaacgaacgttcctttcgaggcatttgccagagtccacgcccgtgga
gcgatccttcattacctacgcgacagtgtcgccctcgtccgcctgccaagacggatcgag
gaggaagcacaacgactcagtcaaatccatcagccaaagaacagccgcgaggagtgggtg
caggctctgtatcggagcaaaaatcgctggctgccctgtccagaggaacagcaggcccaa
tcgaacagcggaattacgatgatggtgaatgcggaacgacgtgacgccattcaattggcc
ttttcccagctcggagatgctgaaaagcacgccgtcaaggcggtggtcattgatgaccga
tgcctgcgcaacgtcggcacaagcctcggagtatctgccatgaccgttcaacgacgggtg
aagaaaggcctcaaacagctgaagctcaggctgggctcacttcaaacagctcactaa
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