Synechococcus sp. WH 8103: SynWH8103_01381
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Entry
SynWH8103_01381 CDS
T04859
Name
(GenBank) Uncharacterized DNA photolyase domain-containingprotein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synw03400
]
SynWH8103_01381
Enzymes [BR:
synw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
SynWH8103_01381
DNA repair and recombination proteins [BR:
synw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
SynWH8103_01381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
FAD_binding_7
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
CRY92109
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Position
complement(1208213..1209700)
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AA seq
495 aa
AA seq
DB search
MDITLVFPHQLFADHPAIQAGRTVALIEDPLLFGTDPQWPLRMHHQRRLLHRASMTVYAE
QLRGRGFNVIHQRHDAAPDTQGHLQLLHSAGYRHVHLVDLVDHWLERRLNAFAESVALRV
SVLPTPMLLTPADVLEKHFGTGKKPLMAKFYEMQRTRLGVLMDAEGRPVGGRWSFDADNR
KKLPKDISVPPIPVATPSTVVNTSRQQLAQENLPGVGKLDGFHYPIDHKEASRWLDNFLD
ERLVQFGAYEDAISTQHQVMWHGVLTPMLNIGLLTPQQVLDRTLARAEVGDVPLNSLEGF
IRQIIGWREFMAAMYRRHGVTMRNGNFWEVEDRPIPEAFYTGSTGLPPIDDAISHALDTG
YCHHIERLMLLGNVMLLCGFHPTRVYSWFMELFVDAYDWVMVPNVYGMSQFADGGIFTTK
PYVSGSNYVRKMSDYRKGAWCEVWDGLFWSFIRRHETFFRSQFRLAMMARNLDRMAPETL
LTHQRKAADFLDGLT
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
gtggacatcaccctggtctttccccatcaactgtttgctgatcaccccgcgattcaggcc
ggtcgcaccgtggccctgatcgaagacccgttgctgttcggaactgatccgcagtggccc
ctgcggatgcatcaccagcgccggctcctgcaccgagcctcgatgactgtctacgccgaa
cagttacgaggtcgtggcttcaacgtgattcatcagcgccatgatgctgcaccagacacc
cagggccacctgcagctgttgcattccgctggatatcgccatgttcacctcgttgacctg
gtggatcactggcttgaacgtcggttgaacgccttcgctgagagtgtcgctctgcgggta
tccgtgctgccgacaccgatgttgttaacccccgctgacgtgctcgagaagcactttggg
acgggcaaaaagcccttgatggccaagttctacgagatgcagcgcacccggctgggggtg
ctcatggacgcggaggggcgacccgttggcggccgatggagttttgatgctgacaaccgc
aagaaactgcccaaagacatcagcgttcctccgatacccgtcgccacgccatcgactgtg
gtgaacacatcacgacagcaattggcgcaggagaatttgcccggggtcggcaagctggat
ggctttcactaccccattgaccacaaggaagcctcccgctggctcgacaatttccttgac
gaacgcctggttcagttcggggcctatgaagacgccatcagcacgcagcatcaggtgatg
tggcatggcgtgctcacaccgatgctgaacattggtctgctgacgcctcagcaggtgctg
gatcggaccctggcccgtgcggaggttggtgatgtgccgctcaactcacttgagggcttc
atccgccaaatcattggctggcgcgaattcatggctgccatgtatcgacgccatggggtg
accatgcgcaatggcaatttctgggaggtggaggatcgcccgattcccgaagccttctac
accggaagcacgggtttacccccgattgatgacgccatcagccatgccttggacacgggt
tattgccaccacatcgaacggttgatgctgctgggcaacgtgatgctgctgtgtggcttt
catcccacgcgggtgtacagctggtttatggaactgtttgttgatgcctacgactgggtg
atggtgcccaacgtctacggcatgagtcagttcgccgatggcggcatcttcaccacaaag
ccctacgtgtccggctcgaactacgtccgcaagatgtcggactatcggaaaggtgcgtgg
tgtgaagtgtgggacgggcttttctggagtttcattcgacgccacgaaacctttttcagg
agtcagttccggctggcgatgatggctcggaacctcgacaggatggcgccggaaacactg
ttgacgcatcagcgcaaggcagctgattttcttgacggcctcacctga
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