Synechococcus sp. WH 8103: SynWH8103_01553
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Entry
SynWH8103_01553 CDS
T04859
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SynWH8103_01553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
synw02022
]
SynWH8103_01553
Two-component system [BR:
synw02022
]
NarL family
LiaS-LiaR (cell wall stress response)
SynWH8103_01553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Response_reg
Sigma70_r4
Sigma70_r4_2
HTH_24
HTH_23
HTH_10
RE_R_Pab1
Crp
Motif
Other DBs
NCBI-ProteinID:
CRY92280
LinkDB
All DBs
Position
complement(1321500..1322207)
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AA seq
235 aa
AA seq
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MELRLDSRTTQEAIAQAAELLEHRRLVLVFGDRLTLSALAIAEPIKPSLVGAATTEDEGL
ELVLRTQPDLLICSSDLETGYGPVLLKRVKAELPTCQLLIMLERETKALVREALDAFADG
VIFKSSLGTGRGDLIGALHTLADGGVYYPAEIRRLAAAAPQPDLPPLVEELTQRELDVAA
AVARGLKNNAIADLLGISLETVKTHVGNAMDKLGARDRTQMAVTALLYGLIDPLD
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggaactccggctcgattcccgcaccacccaggaggcgatcgcccaggccgccgagctg
ctcgaacaccggcgcctcgtgctggtgttcggtgatcggctcaccctcagcgccctagcg
attgctgaaccaatcaagccgtccctggtgggtgccgccaccacagaagacgaaggtctt
gagctggtgctgcgcacccagccggatctgctgatctgcagttcggatctggaaaccggc
tacggcccggtgttgctcaaacgagtgaaggcggagctgcccacctgtcagctgctgatc
atgttggagcgggaaaccaaggccctggtgcgggaggcgctggatgccttcgccgatggg
gtgatcttcaaatcaagcctgggcacgggccgtggtgatctgatcggtgccctgcacacc
ctcgctgatggtggcgtctattaccccgcggagatccgccggctggcggcggcagcaccg
cagcctgatctgccgccgttggtggaggagctcacccagcgcgagctggatgtggcggca
gcggtggcccgtggcctcaagaacaatgccatcgctgatctgctgggcatctccctggaa
acggtgaaaacccatgtgggcaatgccatggacaagctcggtgcccgcgaccgcacccag
atggccgtcaccgccctgctctatggcttgatcgatccgcttgattga
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