Synechococcus sp. WH 8103: SynWH8103_01685
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Entry
SynWH8103_01685 CDS
T04859
Name
(GenBank) uncharacterized conserved membrane protein
KO
K09800
translocation and assembly module TamB
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synw02000
]
SynWH8103_01685
Transporters [BR:
synw02000
]
Other transporters
Pores ion channels [TC:
1
]
SynWH8103_01685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
AsmA
Motif
Other DBs
NCBI-ProteinID:
CRY92412
LinkDB
All DBs
Position
complement(1395078..1399490)
Genome browser
AA seq
1470 aa
AA seq
DB search
MREARRLSRSLILISSAAVGVGSVLAVQTLDRTADEVLASFRGPLERSIGTALGHPITFG
PYKGLRPWGVALGETTIAPTRTDRSTIKVQGLSVHLDPLASLRQWQPVLRLKLQGLDVAL
DRQPDGRYWRFGEVSQDGEAPPDLDLRFELAQPARIRLTPSGDEIQLTSRGSVQIARQRF
SAISRLSRLGRAGSLDLEAKGRWDRPELVLSSRLRSLDLSTLEAVLPGSDATGLAGQAGG
DLAIQWTPSRFLCQGQLKVKDLELHNTTLPDPLRSSAVGVSCRGDRVSLIRSRFRMGDWR
ADARGSVQLDGAVDLRINVASLKRKDRAQLQLDGHWSNPRWRMAGVVTVPELDGPLRVQG
QLRTPWIDPEARQIQVQTALLTSPGLRLHLEGTIDEQIDLRSRELSLAPSLWQRWPALKQ
TLGETSDISGALLASGSLASPALSLELAQDRNLVVQRWDLRASWSKASGLMALDRFNSPV
LRAAAQLPVSWHNGAPQLGALKAGFALTSLPLARLSAVTPLPLQGHLSARGRLQGPFDDV
KTTVALDLLRPGAGPLRLPERWQGQVTGSTASAFNLRLASQAPDTDGALKVRLGSSGWPL
QADLRRGTGSLTVRSGAKGQVEWNADQLSIAGLQLTLPSGSASGSLQGRLSGDGVLALQP
VELVGAVQLEDPQLRGLGLNRIELEGRVSGGRFRALGRLQPQQGEIQLTAEGRVGADLRS
RIEASGLDVPWLVQMARQLRGSQLTATGTPVRAEDLGRLMIDTFGGSLDGHLRALQRSRQ
WLEAYERDHPQARVDPGDLRGRLDAVLNLSGPDLASLSLEAEARAHLWMQGDDQDRMLQL
DPVVAQLSGPLQGGQGRFSLLHLPFSLLALAVPVPSALRGAIGATGSYDLSGAGPLLTTE
LALEQARFGEQELRLERRAVVLSSKGLEVDLALRSIDAAEALQMRGTVPLSLRDALDLEL
ESHGDALSFLAAPAGDALRLTRGSSDLRLLLSGYLDQPQANGFLVIRDGAFTAADQTLKQ
VNASLLFDFNRVEVSQLEATLALGGTISAEGAIGLFIPRDEETPLTIRLTKGTIRQEMVD
LAADADITVRGALSQPLISGQLNLRNGVIQPRSGLLSRLRKGGGASLQQGIQPSQANVST
PFSTAALLEEGWDFQDPLVLFGPGAPAQLPAAFQDLMPDLSAVRFRNFRLGLGPDLQVRM
PPLISFRGGGQLLVNGPLDPSLELRGLIRLNRGRVSLFSTTFRLDPRAPNVAVFTPSLGL
VPFIDIAMKTRVSDAVQPRTAGNASSANVFDTNGLGDGGGQLRLVKVTVEAAGPADRLIG
NLDLRSVPPMSQPQLLALIGGNSLSGLAGAGGAALATVLGQSLLSPVLGTLTDAMGQRLQ
IALFPTYVTPDIKDEDERRSGRVAPTFTLVTEIGVDVTDRFDFSVLAAPNTSDVPPQATV
TYQVTPNTALSGSVDSNGIWQSQLQLFFRF
NT seq
4413 nt
NT seq
+upstream
nt +downstream
nt
atgcgagaagcgcggcggttgtccagatccttgatcctcatttccagcgcggctgttggt
gtcggatctgtcctggcggtgcagaccctggatcgcacggctgatgaggtgcttgcttcg
tttcgcgggccactggaacgcagcatcggtaccgctctcggtcacccgatcacgttcggt
ccttacaaggggttgaggccatggggtgtggccctgggcgagacaaccattgccccgacg
cgtactgatcgctccacgatcaaggtccagggcctgagtgtccatctcgaccctctggcc
agcctgcggcaatggcagccggtgttgcggctgaagctgcagggcctcgatgtggccttg
gatcgccaaccggacggtcgctattggcggttcggagaggtttcgcaggacggggaggcc
cccccggatctggacctgcgctttgaactggctcaaccggcccggattcgcctcaccccc
tctggagatgagatccaactgaccagtcgtgggtctgtgcagatcgcgcggcagcgcttc
tcagcgatctcgcggctgagtcggctcgggcgagccggcagccttgatctggaggccaag
gggcgttgggatcgtccagaactggtgctgagcagtcgtctgcgatccctggatctctcc
acactggaggccgttctgcctggatcggatgccacgggcttagcgggccaagcaggtggt
gacctggcgattcagtggacaccaagccgctttctctgccaggggcagctgaaggtcaag
gatctcgagctgcacaacacaaccctgcccgatcccctgcggtcatccgccgtcggagtg
agctgtcgcggcgatcgggtcagcctgattcgcagtcgtttccgcatgggtgactggcgg
gctgacgccagggggtcggttcagctggatggagctgtggatctgcggatcaatgtggcg
tccttgaagcgcaaggatcgcgctcaactccagctggatggccactggtccaatccccgt
tggcgtatggcgggggttgtgaccgtgcctgaactcgatgggcctttgcgagtgcaaggc
cagctgcgcaccccctggattgatcccgaagcccgccagatccaggttcaaacagccctg
ctcacctcacccggcctgcgcctgcatctggagggcacgatcgacgagcagatcgacctg
cgcagtcgtgaactcagcctggcgccgtcgctctggcagcgatggcccgccctgaaacag
acccttggcgagacatccgacatctccggagcgcttttagcgagcggttccctggcatca
ccagcgctgtcactggagttggcccaggaccgcaatcttgttgtgcagcgatgggatctc
cgcgcgtcctggtcgaaggcctccgggctcatggccctcgatcgtttcaacagtccggtt
ctgcgtgcagcggcgcaactccccgtcagctggcacaacggcgcgccgcagctcggggcg
ctgaaagccggcttcgcgttgacctcactgcccctggcccgcctgtcggccgtcacaccc
cttcctttgcaaggccatctgtccgcccgcggccgattgcagggcccttttgatgatgtg
aagaccactgtggcgttggatctcctccggcctggtgccggaccgttgcgattgccggag
cggtggcagggacaagtgactggatcaaccgcatcggcgttcaacctgcgcctggcatcg
caggctcctgacacggatggagcactgaaggttcggctgggttcctccggttggccattg
caggcagatcttcgtcgtgggaccggcagcttgaccgtgcgttccggcgccaaaggtcag
gtggagtggaatgccgatcagctgtcaatcgcgggtcttcagctgacgctcccttcggga
tcggcatcaggctcgttgcaggggcgtctgagtggcgacggcgtcctggccctgcaaccg
gtggagctggttggtgctgtgcagctggaggacccgcagctccgtggacttggtctgaat
cggatcgagttggagggacgtgtctcaggagggcgcttcagagcccttggccggctgcag
ccgcagcagggtgagattcagctcaccgctgagggacgggtcggggctgatctgcgcagc
cggattgaagcctctggactcgatgtgccctggttggtgcagatggcccgtcagcttcgt
ggcagccagctcaccgccacggggacacctgttcgtgccgaggatctcggcaggttaatg
atcgacaccttcggcggcagtctcgacggtcatctgcgcgcgcttcagcggtctcggcag
tggcttgaggcctacgagcgtgatcatccccaagcgcgcgttgatccaggtgacctgcgc
ggtcgcctggatgctgtcctcaacctttcaggcccggatctggcatcgctctcgctggag
gcggaggcccgggctcatctgtggatgcagggtgatgatcaggaccggatgcttcagctg
gaccccgtggtggctcagctgagcggtcctctgcagggcggccagggtcgcttcagcctt
ctgcatctgcccttttcgctactggccttggccgttccggttccgtccgcgttgcgtggg
gcgatcggtgccaccggctcctacgacctgtcaggtgccggtccgttgctcaccactgag
ttggccctggagcaggcacggttcggtgagcaggagcttcgtcttgaacgccgagccgtt
gtgttgtcctcaaaaggtcttgaagtcgatctcgcactccgcagtatcgatgccgctgag
gccttgcagatgcgcggcactgttccgctgtcactgcgtgatgcgttggatctcgagctt
gaaagccatggggatgcgctgagcttcctggcggccccggccggcgatgccctgcggctg
acacgcggcagcagtgatctgcggttgctgctcagcggatacctggatcagccccaggcc
aatggatttctggtgatccgtgacggtgctttcacggccgctgatcaaaccctgaagcaa
gtcaatgcgtcccttttgtttgatttcaaccgggttgaggtcagccagcttgaggccacc
ctggcgttggggggcacgatctcggctgagggggccatcggtctgttcattccccgtgat
gaggagacaccgctcaccattcgcctgaccaaagggacgatccggcaggagatggttgat
ctggctgcggatgcagacatcacggtgaggggcgcgttgagccagccgctgatcagtggt
cagctcaacctccgtaatggggtgattcagccccgcagcggcttgctgtcgcgtcttcgt
aagggtggtggcgcctcattgcagcaggggattcaaccgtcgcaggccaatgtctcaacg
ccattctccaccgcagcactgcttgaagaaggctgggatttccaagaccccctggtgctg
ttcgggcctggtgcccccgcccagttgccagcggcttttcaggatctgatgccggatctt
tcggcggttcgtttccgcaacttccgtcttggtctggggcccgatctgcaggtgcggatg
ccgccgctgatcagtttccgtggtggtggtcagctgctggtcaatggaccgttggatccg
tcgcttgagctgcggggcctgattcgtctgaaccgcggccgggtcagtctgttttccacc
accttccgcctcgatccacgtgctcccaacgtcgcagtgttcaccccatcgctgggattg
gtgccctttatcgacatagcaatgaagaccagggtctcggatgcggtgcagcccaggacg
gctggcaatgccagctcggccaatgtcttcgacaccaatggtctcggcgatgggggtggc
cagctgcggttggtgaaggtcaccgtggaggccgccggaccggcggatcgtttgatcggc
aatctcgatctgcgcagtgtcccgcccatgtcgcagccgcagctgttggcgctgatcggt
ggcaactctctgtcaggcctggctggagccggtggagccgccctggcgacggtgctggga
cagtcgctgctttcaccggttctcggaacgctcaccgatgccatgggacagcggctccag
atcgccttgttccccacctacgtcacaccggatatcaaggatgaggatgagcgcaggtct
gggcgggtggctcccaccttcacgctggtgacagaaatcggtgttgatgtgaccgatcgc
tttgatttctcggtgcttgcagctccgaacacctcggatgtcccccctcaggcgacggtc
acttaccaggtgacacccaacacggctttgtcagggtccgtcgattccaatggcatctgg
cagagccagctgcagctgttcttccgcttctga
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