Synechococcus sp. WH 8103: SynWH8103_01741
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Entry
SynWH8103_01741 CDS
T04859
Name
(GenBank) putative ABC multidrug efflux transporter
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SynWH8103_01741
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synw02000
]
SynWH8103_01741
Transporters [BR:
synw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SynWH8103_01741
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_16
SMC_N
AAA_22
AAA_21
AAA
AAA_5
DEAD
AAA_30
DUF87
SRP54
nSTAND3
Mg_chelatase
AAA_29
ORC-CDC6-like
Zeta_toxin
AAA_19
TrwB_AAD_bind
AAA_28
TsaE
AAA_18
FtsK_SpoIIIE
AAA_23
AAA_33
cobW
ResIII
APS_kinase
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CRY92467
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Position
complement(1440332..1442110)
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AA seq
592 aa
AA seq
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MSVISDWKRVRRLGRYLVHDRRRLLLTLVLLVPLAVAGAIQPLLVGQAISVLRNEPSLPW
LEGLTTGAAIRLIVSLLLVSVLLHLALQGVQLFNIQAVGQRLTARIRDDLFRHALSLSLR
FHDGMPVGKLLTRLTSDVDALSEVFGSGAVGVLGDLVSLVVIASSMLLIEWRLGLLLLCT
QIPVTLMVIWLQGRYRKANYRVREELSQLNADFQENLQGLEVVQMFRREQVNGERFQRTG
SAYRRAVNGTIFFDSSISAFLEWVSLGAVALVLALGGWMVTSGSMGLGILTTFILYSQRL
FDPLRQLAERFTQIQGGLTAVERIGELMEQPLEIVEDPNATPLRSAGLGEVIFENVSFSY
RPDEPILRNLSFRIAPCEHVALVGPTGSGKTTVIRLLCRLYEPQQGRILLDGRDIRSISI
ADLRRQLGVVLQDTFLFSGNVADNLRLDAEISDQELAGICRDLGLNDLLQRLPNGLETEL
RERGGNLSSGERQLLAVARVAIRNPTVLVMDEATAFMDPSTEATLQRDLDRLLQKRTAVV
IAHRLATVEASDRILVLRRGELIEQGTHLELRARGGLYAQLAELQEKGLARL
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcatcagtgattggaaacgagtgcgtcggctgggccgttatctcgttcatgac
cgccgccgtctgctgctgaccctggtgctgctcgtgccgttagcggtggcgggagcgatt
cagcccctgttggtgggccaggccatcagtgtgttgcgcaacgaacccagccttccctgg
ctggagggtctgacgaccggggccgccatccgcctgatcgtgtcgctgctgctcgtgtcg
gtgctgttgcatctagcgctgcagggggttcagctgttcaacatccaggctgttggtcag
cgacttaccgcacggatccgggatgatctgtttcgtcatgccctgtcgctgtcgctgcgg
ttccacgacggcatgcctgtgggcaagttgctcacacggctcaccagtgatgtcgatgcc
ttgtcggaggtcttcggcagcggagccgttggtgttcttggcgatctggtgagcctggtg
gtgatcgccagctcgatgctgctgatcgaatggcggcttggcctgttgctgctttgcaca
cagatccccgtgaccttgatggtgatctggttgcagggccgttaccgcaaggcgaattac
cgagttcgagaggagctctcccagctcaatgctgattttcaggagaacctgcagggcctg
gaggtggtccagatgtttcggcgcgagcaggtcaacggcgagcgcttccagcgcaccggt
tccgcttacaggcgcgctgtgaatggaacgattttcttcgacagcagcatctctgccttc
ctcgaatgggtttccctaggagctgttgccctggtgttggctcttgggggatggatggtg
acatcaggttccatgggccttggaatcctcaccaccttcatcctctattcccagcgtctg
tttgatccgctgcgtcagctggcggaacggttcacccagattcagggtggtctgacggcc
gtggagcgcatcggtgagctgatggagcagcccctggagatcgtggaggatcccaacgcc
actccgctgcgttcggccggcctgggggaggtgattttcgagaacgtcagcttcagctat
cggccggatgagccgatcctgcgcaacctctccttccgcattgctccatgcgagcacgtg
gccctggtgggaccgacggggtctggaaaaaccaccgtcatccggctgctctgccggctg
tatgaacctcagcagggccggattcttctggatggtcgtgacattcgttcgatttcgatc
gccgatctgcgacgtcagctgggggtggtgttgcaggacaccttcctgttcagcggcaac
gtggccgataaccttcggctcgatgccgagatcagcgatcaggagctggctggaatctgc
cgtgatctgggcctgaacgacctgttgcaacggctgcctaatgggttggagacagagttg
cgggagcgtggcggcaatctctcgtccggtgaacgtcagctgctggcggtggcacgggtt
gcgatccgtaaccccacggtgctggtgatggacgaggccaccgccttcatggatccctcc
acagaggccaccctgcaacgcgacctggatcggttgctgcagaaacgcacggctgtggtg
atcgcccatcgcctggccacggtggaagcctcggatcggattctggtgctgcgccgcggt
gagttgatcgaacagggcacgcacctggagttgcgagcccggggtgggctctacgcccag
ctggcggagctgcaggaaaaggggttggctcgtttgtga
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