Synechococcus sp. WH 8103: SynWH8103_02037
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Entry
SynWH8103_02037 CDS
T04859
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SynWH8103_02037 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synw03400
]
SynWH8103_02037 (priA)
Enzymes [BR:
synw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SynWH8103_02037 (priA)
DNA repair and recombination proteins [BR:
synw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SynWH8103_02037 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
Helicase_C
ResIII
Zn_ribbon_PriA
PriA_3primeBD
AAA_16
Zn_ribbon_6
zf-CHY
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CRY92755
LinkDB
All DBs
Position
complement(1670540..1672783)
Genome browser
AA seq
747 aa
AA seq
DB search
MKFSGLCNPSEKPPDLVEVWLEAGREGRTFTYSADAALGLQAGDLVRVRLRGRPLHGLVV
ARYNVSLGATVPDKVQAVEGLVQQAAVDPQWRLWLEGVAERCHLSVFRMLKAALPAGWLG
QARTLSEGRALLWVERLQPPVPAPPLTSRQQQLLNALDVAGSGLWQRSLEASGFSPSMVR
VLETKGWVRRDRRPLSTGVMSVAPLEAARPLTSEQQQVMQRFEAVPDGEGMLLWGITGSG
KTEVYLQLAEKELAAGRHVLILTPEIGLIPQLVDRCRRRFGSRVLEYHSGCRDRERLQVW
RRCLAPEQPLLVVGTRSAVFIPLSPLGLVVLDEEHDSSYKQAAPMPCYHARDLAWDRIRA
GGGRLVLGSATPSLDSWVQLHPDGPLRLGRLTQRISQQSLPPVHVVDMRHELAEGHRRLI
SRPLMDRLAELPEKGEQAVILVPRRGYSPFLGCRSCGEVVMCPNCDVALTVHRGSGGRQW
LRCHWCDHRDEIGNRCAHCGSTAFNPFGAGTQKVMELLNEELDGLRLLRFDRDSTGGRDG
HRRLLDRFASGKADVLIGTQMLAKGMDLPQVTLAAVLAADGLLHRPDLRASEQALQLLMQ
LAGRAGRGERPGQVLVQTYCPDHHVIRHLVDGRYEAFLAQEVQLRREAALVPFSRACLLR
LSGESASATATAASVLAERVRPLCRDRGWWVLGPAPAPVARAAGRSRWQLLLHGPVGSPL
PLPPGPTLWDELPRGVALAVDPDPLEL
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttcaggcctttgcaacccctccgaaaagcctcctgatctcgttgaggtctgg
cttgaggctgggcgtgagggcaggaccttcacctacagcgccgatgcagcacttggattg
caggccggcgatctggtgcgggtgcggctgaggggacgccctctgcatggattggtggtt
gccagatacaacgtgtccttgggggccacagtgccggacaaggttcaggcggttgaaggc
ctggtgcagcaagctgccgttgacccccagtggcgcctctggcttgagggtgtggctgaa
cgctgccatctcagtgtgttccggatgctgaaagcagccctacccgccggttggctgggc
caggcccggaccctgtctgaaggtcgtgccctgttgtgggtggagcggttgcagccaccc
gtgcccgctccgcctctcacgtcccgccagcagcaactcctgaatgcgctggatgttgcg
gggtcgggactgtggcagcgctcgctggaagcctcgggcttcagcccatccatggtccgg
gtcttggagacaaaaggctgggtgcgccgggatcggcgtcccctctccacaggggtgatg
tctgttgccccactggaggccgctcggcccctcactagcgagcagcagcaggtgatgcag
cgctttgaggccgttcccgatggagaggggatgctgctttggggcatcaccgggtcgggc
aagaccgaggtatatctgcagttggcggagaaggagttggcggccggccgtcacgtgttg
atcctcacccctgaaatcggcctgattcctcagttggtggatcgttgccgacgtcgcttc
ggctccagggttctcgaatatcacagcggttgccgggatcgagagcgcctccaggtgtgg
cgccgctgcctcgcgcccgagcagcctctgctggtggtgggaacacgctcagcagtgttc
attcccctctcgccactggggttggtggtgctggatgaggaacacgacagctcatataaa
caggccgcaccgatgccctgctaccacgccagggacctggcttgggatcggattcgtgcc
ggtggtgggcgcctggtgctcggcagcgccaccccatcactggacagctgggtgcaactg
catcccgatgggcccctgcgtctgggacgtctgactcagcggatctcccagcagtctctg
cctcctgtccatgtggtggacatgcggcatgagctcgccgaaggacaccgtcgactgatc
agtcgtccgctgatggatcgattggccgagctgccggagaagggggaacaggcggtgatc
ctcgtgccacgacggggctacagcccttttttggggtgccgtagttgtggggaggtggtg
atgtgcccgaactgtgatgtggcgctcacggtccaccgcggttccggtggtcgtcagtgg
ctgcgttgtcactggtgtgatcaccgagatgagatcggcaaccgttgcgcccattgcggg
tccaccgccttcaatcccttcggtgccggaacccagaaggtcatggagttgctcaatgag
gaattggatgggctgcggctgctccggttcgaccgtgactccaccggtggtcgtgacgga
caccgtcgcttgctggatcgttttgcctccggcaaggcggatgtgttgatcggaacccag
atgttggctaagggcatggaccttccccaggtgacgctggcggcggtgctggcggcggat
ggcctgttgcaccgtcccgatctacgggcctcagaacaggctctgcaattgctgatgcag
ctggcgggtcgtgctgggcggggcgaacgccccggtcaggtgctggtgcagacctactgc
cctgaccatcacgtgattcgccacctggtggatggccggtatgaggctttcctggcccag
gaggtgcagctgcggcgggaggcggcgctcgtgcccttcagccgcgcctgtctgctgcgg
ttgtccggtgagtccgccagcgccaccgccacggcggcatcggttctggcggagcgggtg
cgtcctctctgtcgcgaccgtggctggtgggtgttggggcctgccccagccccggtggca
cgggcggcagggcggagccgatggcagttgctgctccacggtccggtgggctcccccctg
ccgcttccccccggcccgaccctctgggacgaacttcctcgaggtgtggctctggcggtg
gatcctgatcccctggagctgtag
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integrated database retrieval system
