Synechococcus sp. WH 8103: SynWH8103_02155
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Entry
SynWH8103_02155 CDS
T04859
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SynWH8103_02155 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synw03019
]
SynWH8103_02155 (pnp)
03016 Transfer RNA biogenesis [BR:
synw03016
]
SynWH8103_02155 (pnp)
Enzymes [BR:
synw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SynWH8103_02155 (pnp)
Messenger RNA biogenesis [BR:
synw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SynWH8103_02155 (pnp)
Transfer RNA biogenesis [BR:
synw03016
]
Prokaryotic type
tRNA degradation factors
SynWH8103_02155 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KhpA-B_KH
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
CRY92870
LinkDB
All DBs
Position
1769340..1771505
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AA seq
721 aa
AA seq
DB search
MQGQTQSISFDGREIRLTTGRFAPQAGGSVLVECGDTAVLVTATRSGGREGIDFLPLICD
YEERLYAAGRIPGSYQRREGRPPERATLTARLIDRPMRPLFPGWLRDDLQVVATCLSLDE
RVPADVLAVTGASIATLLAGIPFNGPMAAVRVGLLGDDFVLNPSYREIERGDLDLIVAGT
PDGVVMVEAGGNQLPEQDVIEAIDFGYEAICELIKAQEQLLKDLGIEQVKPETPKQDTTV
PAYLEKQCTKAISEVLKKFDQTKDERDKALDAIKAEAAEAIAGLKEDDAIRVATASNSKL
LGNSFKALTKTLMRQQILKDGKRVDGRALDEVRAISALAGVLPRRVHGSGLFQRGLTQVL
STATLGTPSDAQEMDDLHPSTEKLYLHHYNFPPYSVGETRPMRSPGRREIGHGALAERAI
LPVLPAKDTFPYVVRVVSEVLSSNGSTSMGSVCGSTLSLMDAGVPLKAPVSGAAMGLIKE
GDDIRILTDIQGIEDFLGDMDFKVAGSEKGITALQMDMKITGLPVKTIAEAINQARPARL
HILEKMLEAIDTPREGLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
SGIVTIASHDGAAADEAQKIIEGLTRKVNEGEVFSGSITRIIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDEVTVRVREIDNRGRINLTLRGVPQSGDGAGEEPQPTPVAPL
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggacaaacccagtcgatctcctttgatggacgcgagattcgactgaccaccgga
cgttttgccccccaggcgggcggatccgttcttgttgaatgcggagacaccgccgtgctg
gtgaccgccacccgctccggcggacgggagggcatcgattttctgcctctgatctgcgat
tacgaggagcggctctacgccgctggtcggatccccggcagctaccagcggcgtgagggt
cgtccccccgagcgggccaccctcaccgcccgtctgatcgaccggccgatgcggcccctg
ttcccaggttggctgcgggacgaccttcaggtggtcgccacctgtctgtccctggacgaa
cgtgtcccggcggatgtgcttgccgtgaccggtgcctccatcgccacgctgctggcgggc
attcccttcaatggtccgatggcggccgtgcgggtgggcctgctcggcgatgacttcgtg
ctcaacccgagttatcgcgaaattgaacgcggggatctcgatctgatcgtcgccggcacc
ccggatggtgtggtgatggtggaggctggtggcaaccagctacccgaacaggatgtgatc
gaagcgatcgacttcggttacgaagcgatctgcgaattgatcaaagcccaggagcaactg
ctgaaggatctgggcatcgaacaggtgaagccggagacccccaagcaggacaccacagtg
ccggcttacctggagaagcagtgcaccaaggcgatcagcgaggtgctcaagaaattcgac
cagaccaaggatgagcgcgacaaggcccttgatgcgatcaaggcggaagccgctgaagcc
atcgccggcctgaaggaggacgatgccatccgtgtggccaccgcctccaattcgaagctg
ctcggtaacagcttcaaggcgctgaccaaaaccctgatgcgccagcagatcctcaaagac
ggcaagcgagtggacggtcgcgccctggatgaggtgcgggccatcagtgccttggctggg
gtcctccctcgacgggtccatggttccggcctattccagcgtggtctcacccaggtgctc
tccaccgccaccctgggcacacccagcgatgcccaggagatggatgacctccatcccagc
accgagaagctgtacctgcaccactacaacttcccgccttattccgtcggcgaaacccga
ccgatgcgctccccaggacgccgcgaaattggtcatggcgccttggccgaacgggccatc
ctgccggtgcttcccgccaaggacaccttcccttacgtggtgcgggtggtgagtgaagta
ctcagttccaacggctctacctcgatgggctccgtctgcggcagcaccctgtcgctgatg
gatgccggagtccccctcaaggcaccagtgagcggtgcggccatgggcttgatcaaggag
ggcgatgacatccgcatcctcacggacatccagggaatcgaagatttcctcggcgacatg
gatttcaaagtcgctggcagcgagaagggcatcacggccctgcagatggacatgaagatc
accggtctgccggtgaagacgatcgccgaggcgatcaaccaggcccgtccagcccgtctg
cacatccttgaaaagatgctggaggcgatcgacacaccacgcgaaggcctgtccccccat
gccccgcgcctgctgagcttccggatcgatcccgagctgattggcacggtgatcggtccc
ggcggccgcacgatcaaaggcatcaccgagcgcaccaacaccaagatcgacatcgaggac
agcggaatcgtcaccatcgcctcccatgacggtgcggcggctgatgaagctcagaagatc
atcgaaggcctcacccgcaaggtgaatgaaggcgaggtgttctcaggatcgatcacccgg
atcatccccatcggtgccttcgtcgagatcctgcctggcaaggaaggcatgatccacatt
tctcaactctccgaagccagggtggagaaggtggaggacgtcgtgaaggtgggtgacgag
gtcaccgtgcgtgttcgggaaatcgacaaccgcggccggatcaacctcaccctgcggggc
gtgccccagagcggcgacggtgccggggaggagcctcagcccacccctgtggcaccgctg
agctga
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