Synechococcus sp. WH 8103: SynWH8103_02293
Help
Entry
SynWH8103_02293 CDS
T04859
Symbol
mpeD
Name
(GenBank) rod linker polypeptide (Lr), C-phycoerythrin I nd II-associated
KO
K05379
phycoerythrin-associated linker protein
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw00196
Photosynthesis - antenna proteins
synw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09100 Metabolism
09102 Energy metabolism
00196 Photosynthesis - antenna proteins
SynWH8103_02293 (mpeD)
09180 Brite Hierarchies
09181 Protein families: metabolism
00194 Photosynthesis proteins [BR:
synw00194
]
SynWH8103_02293 (mpeD)
Photosynthesis proteins [BR:
synw00194
]
Antenna proteins
Phycobilisome - Cyanobacteria, Red alga [OT]
Phycoerythrin (PE)
SynWH8103_02293 (mpeD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PBS_linker_poly
CpcD
TetR
Motif
Other DBs
NCBI-ProteinID:
CRY92992
LinkDB
All DBs
Position
1872664..1874310
Genome browser
AA seq
548 aa
AA seq
DB search
MASNQTSLGFGATTKWGNPVSFQRKGQAGQKPALTIGEFKKQSCDQMAIGVGPRSHADCP
HRVTSECYSPEDNGSLETVIAASYRQVFGNAHVMNFERCTELEAQLRDGRLTVRDFIRGL
AKSSFYKSRFFNSVAPQRGVELNVKHLLGRAPETQAEISAMITLQAEQGQGALIDSIVDS
AEYLEVFGIDVVPYARSWSSPADLSTAAFPMLAALEKSFAGSDSARGGSPALTRSLASGI
APRISVPSQAVGVRPSASFTSGRFSSKAPGITSGNDSAPLRGDAYVTFGLGQREQETFQR
CPGDSPDQLNALIRSAYKQVMGNPHLMEFERALSAESKFIDGYLSTREFVRAVGLSAEYK
RRFFETNAPYRFIELNFKHFLGRAPQSQAEISEHTKILAEGGYEAEICSYVDSVEYQSIF
GEDTIPYARILTENGRSQVAFNRHLSLAEGFAASDTVLSSSSLVSSVATGMVPSGWSATT
TRINRTGTQSGAPDPTKKRFRIVVATQAARSRQRTAGNTYLVSGKDMSSQMKYIHARGGK
IVSITEVM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaatcaaacatcactcggctttggagcaaccacgaagtggggaaatccagtc
agcttccagcgcaaaggccaagctggtcagaagccggccctgacaattggggagttcaag
aagcaatcctgcgatcaaatggcgatcggggtggggccccgtagtcacgccgactgccct
caccgtgtcacaagtgagtgctacagcccggaggacaatggttctctagagacagtcatt
gcagcgtcgtaccgacaggtcttcgggaacgctcatgtcatgaattttgagcggtgcaca
gaacttgaagctcagctcagggacggccgtctgacagtgcgtgatttcattagaggtctg
gcaaagtcaagcttctacaagagccggttcttcaacagcgttgctccacagcggggtgtt
gaactgaatgtcaaacatcttctagggcgcgctccggaaactcaggctgagatttctgcc
atgatcaccctgcaggcagaacaggggcagggagccctgatcgacagcatcgtcgattca
gctgaatacctcgaggtatttggaatcgatgttgtgccttatgcccgctcttggagttct
cctgcagacctctcgactgctgcattcccgatgctggcagctctcgagaagagtttcgcc
ggcagtgatagtgcccgtggaggaagccctgcgctaaccagaagcctggcctccggcatc
gctcctcggatcagcgtcccgagtcaggccgtgggcgtgcgtccctccgcaagcttcact
tctggtcgtttcagcagcaaagctcctggcatcaccagtggtaatgactccgctccgctt
cgcggcgacgcatacgtcaccttcggtcttggtcagcgtgagcaggaaacatttcagcgt
tgcccaggagacagcccggatcagctcaatgccctgattcgctctgcatacaaacaggtc
atgggtaacccccacctgatggagtttgaacgcgctctgtcggcagaaagcaagttcatt
gatggttatttgagcacccgtgaatttgtgcgggctgtcggactttcagctgaatacaag
cggcgattcttcgaaaccaacgctccttatcgattcatcgagctgaacttcaaacatttc
cttggtagagccccacagtctcaggcggagatcagcgaacacaccaagatcctcgccgaa
ggtggttatgaagctgaaatctgcagctacgtcgacagcgtggagtatcagagcatcttt
ggtgaagacaccattccatacgccaggatccttaccgaaaacggccgctcccaggttgcc
ttcaatcgacatctcagcctggcagaaggcttcgcagctagtgacacggtcctgagcagc
tcctctcttgtctcctccgttgccacaggaatggttcccagtggatggagtgctacgacc
acccgaatcaaccgaactggaacacagtcaggcgctcctgatcccacgaagaagcgcttc
cggattgtcgtagcaacccaggcagctcggtcacgtcagcgcaccgcaggaaacacttat
ctcgtctccggcaaggacatgtccagccaaatgaagtacatccatgcacgtggaggcaaa
attgtctccatcactgaggtgatgtaa
DBGET
integrated database retrieval system
