Synechococcus sp. WH 8103: SynWH8103_02342
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Entry
SynWH8103_02342 CDS
T04859
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synw03016
]
SynWH8103_02342 (rnd)
Enzymes [BR:
synw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SynWH8103_02342 (rnd)
Transfer RNA biogenesis [BR:
synw03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SynWH8103_02342 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CRY93036
LinkDB
All DBs
Position
complement(1905098..1905742)
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AA seq
214 aa
AA seq
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MADSLPAPAEFAVFDGDLDADWTERYLRMSALAVDTEAMGLIHGRDRLCLVQIADADDRV
CCIRIGLGQTSAPNLQRLLEAASVEKVFHFARFDVAALASGLGIAVSPIFCTKVGSRLGR
TYTPRHGLKDLVMELVGVELDKGAQSSDWGRVDELSDVQLAYAANDVRYLLPARQKLEAM
LRREGRWDLAQRCFGCIPVIADLDRMRFNQTFEH
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcgcttcctgctcccgctgaattcgcggtctttgacggcgatctggatgcg
gattggaccgagcgatacctgcgcatgtccgccctggcggtggacaccgaggcgatgggt
ctgatccatggccgtgatcgtctctgcctggttcagatcgctgatgccgacgatcgggtc
tgctgcattcggatcggacttggtcagacctcggcgcccaatctgcagcggctcctggag
gccgcttccgtggaaaaggtcttccacttcgcccgcttcgatgtggcagcgctggccagc
ggcctcggcatcgccgtcagccccatcttctgcaccaaggtgggtagccgtcttggtcgc
acctacacaccccgccatggtttgaaggacctggtgatggagctggtcggggttgaactc
gacaagggtgcccagagcagcgactggggccgggtggatgagctcagcgatgttcagctc
gcctacgccgccaatgatgtgcgctatctgctgccggcacgtcagaagctggaagccatg
ctgcgtcgtgaggggcgctgggatctggcgcagcgttgcttcggatgcattcctgtgatc
gcggatctggatcggatgcgcttcaaccagaccttcgagcactga
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