Synechococcus sp. WH 8103: SynWH8103_02569
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Entry
SynWH8103_02569 CDS
T04859
Symbol
rpaA
Name
(GenBank) two component transcriptional regulator, winged elix OmpR family protein
KO
K10697
two-component system, OmpR family, response regulator RpaA
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SynWH8103_02569 (rpaA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
synw02022
]
SynWH8103_02569 (rpaA)
Two-component system [BR:
synw02022
]
OmpR family
SasA-RpaAB (circadian timing mediating)
SynWH8103_02569 (rpaA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
CRY93248
LinkDB
All DBs
Position
2106226..2107014
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AA seq
262 aa
AA seq
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MKPCILLIEDDQDMRDLVSGHLEHSGFDVQRADDGIKGQALALQYTPDLILLDLMLPKVD
GLTLCQRLRRDDRTSGIPILMLTALGGTKDKVSGFNSGADDYLTKPFDLEELQARVKALL
RRSDRAPVGSSNHNEILSYGPLTLVPERFEAIWFDTPVRLTHLEFELLHCLLQRHGQTVA
PSLILKEVWGYEPDDDIETIRVHVRHLRTKLEPDPRKPRFIKTVYGAGYSLELPIGGELD
DLQDVVAIARNERNQDSERASA
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttgcatcctgctgatcgaagacgaccaggacatgcgcgacctggtgagcggc
catttggagcacagtggctttgacgttcaacgggccgatgacggcatcaagggccaggcc
cttgcgctccagtacaccccggatctgatcctgctggacctgatgctgcccaaagtcgat
ggcctgaccctctgtcagcgcctgcgccgcgatgaccgcacctccggcatcccgatcctg
atgctcacggccctcggcggcaccaaggacaaggtcagtggtttcaactcaggcgccgac
gactacctcaccaagccctttgatctggaagagctgcaggcgcgggtgaaggcactcctc
cgccgcagtgatcgtgctcccgtgggctcgagcaaccacaacgaaatcctcagttacgga
ccgctcacccttgttcctgagcggtttgaagcgatctggttcgacaccccggtgcgactc
acccacctggaattcgaactgctccactgcctgttgcaacgccacggacagaccgtcgct
ccatccctgattctcaaagaggtctggggctacgaaccggacgacgacatcgaaaccatt
cgtgttcacgtgcgtcatctgcgcaccaaacttgaacctgacccgcgcaagccacgcttc
atcaagaccgtgtacggagccggctacagccttgagttgccgatcggtggcgagctggac
gaccttcaagatgttgttgccatcgcccgcaatgagcgcaatcaagacagtgaacgggcc
agcgcctga
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