Synechococcus sp. WH 8103: SynWH8103_02664
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Entry
SynWH8103_02664 CDS
T04859
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synw03016
]
SynWH8103_02664 (trmE)
Transfer RNA biogenesis [BR:
synw03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SynWH8103_02664 (trmE)
Prokaryotic type
Methyltransferases
SynWH8103_02664 (trmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
MMR_HSR1
TrmE_N
FeoB_N
Dynamin_N
GTP_EFTU
Ras
AIG1
RsgA_GTPase
Roc
MCM
AAA_28
ABC_tran
AAA_18
Motif
Other DBs
NCBI-ProteinID:
CRY93343
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Position
complement(2196206..2197402)
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AA seq
398 aa
AA seq
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MYGHVIDGEGRRLDEVLLLLMRGPRSFTGEDVVEIHCHGGVVAVQQVLERVLAHPGVRRA
LPGEFSQRAVLNGRLDLTRAEAVSELVAARSRRAAELAMAGLDGGIQAKITALRERLLDQ
LTELEARVDFEEDLPPLDGDALLDGLQQVRQALLTLVADGERADALRSGLRVALVGRPNV
GKSSLLNRLSRRERAIVTELPGTTRDLLESEIVLEGVPITLLDTAGIRSTDDAVEQLGIA
RSEEALATADVVLLVLDGHAGWTAEDAALLARIPEHIPRILVANKADLPAGALPQPVDVQ
LSALEGTGEEDLVQALLERCGAAGTEGVLLALNERQRDLAATAAAALGRSQEVAAQQLPW
DFWTIDLREAIRALGEITGEELTEAVLDRVFSRFCIGK
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgtatggccatgtgatcgatggcgagggacggcgtctcgatgaggtgctgctgctgcta
atgcgtggacctcgcagttttacgggtgaggacgtggtggagatccactgccatggcggg
gtggtcgcggtgcagcaggtgctggaacgggtgctggcgcatccgggggtgcggcgggcg
ttgccgggggaattcagccaaagggccgtgctcaatggtcggctcgatctcacccgcgcg
gaggcagtgagtgaattggtggcggcccgcagtcggcgggccgccgagttggcaatggcc
ggcctcgatggcgggatccaggccaagatcacggccctgcgggagcggctgctggatcag
ctcaccgagctggaggcgcgggtggatttcgaggaggatctgccgccgttggatggcgat
gccttgctggatggcttgcagcaggtgcgccaggcgctactcaccctggtggcggatgga
gagcgcgcggatgctctgcgcagcggtcttcgggtggcgttggtgggccgccccaacgtg
ggcaagagctcgctgttgaatcggctcagccggcgggagcgggcgattgtgactgagctg
ccgggtaccacccgcgatctgctggagagcgagatcgtgttggagggggtgccgatcaca
ctgctcgataccgccggcattcgaagcaccgacgatgcggtggaacagctgggaattgcc
cgcagcgaagaggctctggccacggcggatgtagtgctgttagtgctcgatggtcatgcg
ggctggaccgccgaagacgctgctttgctggcgcgcatcccggagcacatccccaggatc
cttgtcgccaacaaggcggatcttcccgcgggggccttgccccagccagtggatgtgcag
ctgtcggcgttggagggcacgggtgaagaagacctggtgcaggctctgctggagcgttgt
ggggctgctggtactgaaggggtgctactagcgctgaacgagcgccaaagggatctggcc
gctactgccgccgctgctcttggccgcagtcaggaggtggcggcccagcaattgccctgg
gacttctggacgatcgacctacgcgaggcgatccgggctctgggtgagatcaccggcgag
gagctcactgaagcggtgcttgatcgcgtgttttcccgcttctgcattggcaaatga
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