Synechococcus sp. WH 8103: SynWH8103_02719
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Entry
SynWH8103_02719 CDS
T04859
Name
(GenBank) superfamily II DNA/RNA helicases, SNF2 family
Organism
synw
Synechococcus sp. WH 8103
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
CRY93398
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Position
2259228..2262419
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AA seq
1063 aa
AA seq
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MSLLHATWLPAIRTSGSSGQPALLIWADTWRVATPEGPGLTPALHPFTLEPDDLKAWLQE
RDLLPGGSIDATACLTLPSRTVKPRKSRSKTAEPAPEEPIWTGLPMQAGEPIPKQTEWWP
WQVQGLAVEPSAATEWLSRLPLSGRNPDLADELRWWSHLQRWALSLVARGRWIPQMELSK
GEGYPHRARWVPLLNREEDRRRLEDLAASLPLVATCALPWREPMGRRSNRMTRLRPEAMR
AANPVACCRPRSGRLRVATLLEDLVDAQLRKDFEPSTDGLDPLLTLWQDALGSETGVIEI
GDEQAERLASASFHWREGIAGDFAAARTCLELQTPAEGEELWELRFGLQAESDPSLKLPA
AAAWASGADQLQLGEVTVEQPGEVLLEGLGRALTVFPPIERGLETATPDTMQLTPAEAFV
LVRTAARQLRDAGVGVDLPPSLSGGLASRLGLAIKAELPERSSGFSLGESLDWSWDLMIG
GVTLTLRELERLSGKRSPLVRHKGAWIELRPNDLRNAERFCGANPELSLDDALRITATEG
DLLMRLPVHRFEAGPRLQAVLEQYHQQKAPDPLPAPEGFCGQLRPYQERGLGWLAFLNRF
DQGACLADDMGLGKTIQLLAFLQHLKAEQELKRPVLLVAPTSVLTNWRREAEAFTPELAV
REHYGPRRPSTPAALKKALKDVDLVLTSYGLLQRDSELLESQDWQGVVIDEAQAIKNPSA
KQSQAARDLARPAKGNRFRIALTGTPVENRVSELWALMDFLSPKVLGEEDFFRQRYRMPI
ERYGDMASLRDLKARVGPFILRRLKTDKTIISDLPEKVELSEWVGLSKEQKSLYSKTVED
TLDAIARAPRGQRHGQVLGLLTRLKQICNHPALALSENAVDDGFLGRSAKLQRLEEILDE
VIEAGDRALLFTQFAEWGHLLQSWMQQRWKADVPFLHGGTRKNERQAMVDRFQEDPRGPQ
LFLLSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATDRAYRIGQTNRVMVHKFITSGSV
EEKIDRMIREKSRLAEDVIGSGEDWLGSLAGDQLRNLVALEDT
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacgccacctggcttcccgccatccgtacctctggcagttccggccaa
ccggcactgctcatttgggctgacacctggcgggtggcgacaccagagggccccgggcta
actccggcgctgcacccgttcaccctggaacccgacgacctcaaggcctggcttcaggaa
cgcgacctgttgccaggcggcagcatcgatgccaccgcctgcctcaccctgcccagtcgc
acggtaaaaccccgcaagagccgcagcaaaacggccgaaccagcgcccgaagagcccatc
tggaccggtctgccgatgcaggccggagagccgattccgaaacagacagaatggtggccg
tggcaagtccagggcctcgctgtcgagccctctgccgccacggagtggctctcacgcctt
cccctgtcaggacggaatccagacctggccgatgagctgcgctggtggagccacctgcag
cgctgggccctcagccttgtggcccgggggcgctggattccccagatggaactgagcaaa
ggcgagggatatccccaccgggcccgttgggtgcctctgctcaaccgcgaggaggaccgg
cgacgtctggaggatctggccgccagcctgccgctggtggccacctgcgccctgccctgg
cgggaaccgatgggtcggcgcagcaaccgcatgacacggctgcgtccggaggccatgcgt
gccgccaacccggtggcctgctgccggccccgcagtggccgcctgcgggtggccacgctg
ctggaggatctggtcgacgcacagctgcgcaaggactttgaaccatccaccgacggcctc
gatcccctgttgaccctgtggcaagacgccctgggctccgaaacaggggtgattgagatc
ggtgatgaacaggccgaacggctggccagcgccagcttccattggcgcgagggcatcgct
ggagatttcgccgctgcacgcacctgcctggaactgcagacacctgcagagggagaagag
ctctgggagctgcggtttgggctgcaggcggagtcggatccgagcctcaagctgcccgcc
gctgcggcctgggcctccggtgccgaccaactccagttgggagaagtgacagtcgagcag
cccggtgaagtgctgctggagggtctgggacgcgccctcaccgtgttcccaccgatcgaa
aggggcctggagaccgctacgcctgacacgatgcagctgacccccgccgaagccttcgtg
ctggtgcggaccgcagcgcggcagctgcgggatgccggcgtcggcgtcgaccttcccccc
agcctgtcggggggcctggccagccgcctgggtctggcgatcaaggcggagctgccagag
cgctccagcggcttcagcctcggcgaatccctcgactggagctgggatctgatgatcggc
ggggtgacgctcaccctgcgggaactggagcggttgagcggcaaacgcagccccctcgtg
cgccacaagggggcctggatcgaattgcgaccgaacgatctgagaaacgccgaacgcttc
tgcggtgccaacccggagctcagcctggacgatgccctgcggatcaccgccaccgaaggc
gatctgctgatgcgtctgccggtgcatcgctttgaggccggccccaggctgcaggcggtg
ctggagcagtaccaccagcagaaggccccggatccgttgccagcgccggaggggttctgc
ggccagctgcggccttaccaggagcgtggcctgggctggctggccttcctcaaccgcttc
gaccaaggcgcctgcctggcggacgacatgggtctgggcaagaccatccagctgctggcc
ttcctgcagcacctgaaagcagagcaggaactgaagcgcccggtgctgctggtggccccc
acatcggtgctcacaaactggcgacgggaagcggaagccttcacccccgaactggcggtg
cgcgagcactacggaccgcggcgtccctccactccggctgcgctgaagaaggcgttgaag
gatgtcgacttagtcctaaccagctacggcctactgcagagggacagtgaattgctggag
tctcaggattggcagggggttgtgatcgatgaagcccaagcgatcaagaatcccagtgcc
aagcagagccaggcagcccgagacctggccagaccagccaaaggcaaccgcttccgcatc
gccctcacgggcacaccggttgagaacagggtcagcgagctctgggctttgatggatttc
ctcagtcccaaggtgctgggagaagaagacttcttccgtcagcgctaccggatgccgatc
gagcgctatggcgacatggcatccctacgggacttaaaagccagggtcggccccttcatc
ctgcgccggctgaaaaccgacaagacgatcatttccgatctgcccgagaaggtggaactc
agcgaatgggtggggttgagcaaggagcagaaatcgctgtacagcaaaaccgttgaagac
accctggatgccattgcccgggcgcctcgtggacagcgccatggtcaggtgctgggactg
ctcacccgcctgaagcagatctgcaaccatccggccctggcattgagtgaaaacgctgtt
gacgacggctttctggggcgctccgccaagttgcaacggcttgaggaaatcctcgatgag
gtgatcgaagcaggggatcgggcgctgctgttcacccagttcgccgagtggggccatctg
ctgcagtcctggatgcaacaacgttggaaggcggatgtgcccttcctgcatggagggacg
cgcaaaaacgaacggcaggccatggtggatcgttttcaggaggacccccgcggcccgcag
ctgttcctgctgtcgctcaaagccggcggggtgggtctgaacctgaccagggccagccac
gtgttccacatcgatcgctggtggaaccctgcggtagagaaccaggccaccgaccgtgct
tatcggatcggccagaccaaccgggtgatggtgcacaaattcatcacaagcggatcggta
gaagaaaaaattgaccgaatgatccgagagaagtcgcgcctggcagaggatgtgatcggt
tccggtgaagactggctcgggagcctggccggtgatcagctgcgcaatctcgttgccctg
gaggacacctga
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