Synechococcus sp. WH 8103: SynWH8103_02912
Help
Entry
SynWH8103_02912 CDS
T04859
Symbol
uvrA
Name
(GenBank) Excinuclease ATPase subunit (Excinuclease ABC subunit A)
KO
K03701
excinuclease ABC subunit A
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SynWH8103_02912 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synw03400
]
SynWH8103_02912 (uvrA)
DNA repair and recombination proteins [BR:
synw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SynWH8103_02912 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SynWH8103_02912 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_21
nSTAND3
AAA_33
NACHT
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
ATPase
MeaB
cobW
DUF5975
Motif
Other DBs
NCBI-ProteinID:
CRY93589
LinkDB
All DBs
Position
complement(2421040..2424012)
Genome browser
AA seq
990 aa
AA seq
DB search
MVRAAAKSTDRTAPVNLSGGSLEDVIRVRGARQHNLKNVDVTIPRNKLVVFTGVSGSGKS
SLAFDTIFAEGQRRYVESLSAYARQFLGQVDKPDVDAIEGLSPAISIDQKSTSHNPRSTV
GTVTEIQDYLRLLFGRAGEPHCPQCDRSIRPQSIDEMVDQILVLPEGTRYQLLAPVVRGK
KGTHTKMISGLAAEGFARVRIDGEVRELADNIELDKNHAHNIEVVVDRLVARDGIQERLT
DSLRTVLKRGDGLALVEVVPKKGEELPDGVERERLYSEKFACPVHGAVMEELSPRLFSFN
SPYGACEACHGIGHLRKFTVDRVIPDPTQPVYSAVAPWAEKDNSYYFSLLYSVGEAFGFE
IKTPWNQLTDEQRDVLLHGSREPILIQADSRYRKGKAGYNRPFEGILPILERQLRDASGE
AQRQKLEKFLELVPCEACAGQRLRPEALAVKVGPFCIPELTAVSVGQTLDRIEQLMGVGS
HEGANPLLNDRQIQIGDLVLREIRLRLKFLLDVGLDYLSLDRPAMTLSGGEAQRIRLATQ
IGAGLTGVLYVLDEPSIGLHQRDNDRLLNTLVRLRDLGNTLVVVEHDEDTIRAADHVVDI
GPGAGVHGGHIVAEGSFEDLINSEASLTGAYLSGRRSIPTPAERRQSGTRSLKLLDCNRN
NLKNVSVEFPLGRLVSVTGVSGSGKSTLVNELLHPALENGLGMKVPFPQGLAELRGLKSI
DKVIVIDQSPIGRTPRSNPATYTGAFDPIRQVFAATVEAKARGYQVGQFSFNVKGGRCEA
CRGQGVNVIEMNFLPDVYVQCDVCKGARFNRETLQVKYKGYTIADVLQMTVEQAAEVFDA
IPQAADRLRTLVDVGLGYVKLGQPAPTLSGGEAQRVKLATELSRRATGKTLYLIDEPTTG
LSFYDVHKLMDVMQRLVDKGNSIICIEHNLDVIRCSDWIIDLGPEGGDKGGELLVTGTPE
EVAQHPTSHTGRYLARVLEQHPPEIPLIAA
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagctgctgccaagagcacggatcgaacggctcctgtgaatctgtccggcggc
agcctggaggatgtgatccgggtgcgtggcgctcgccagcacaacctcaagaacgtcgac
gtcaccattccccgcaacaagctggtggtgttcaccggcgttagtggcagcggcaaaagc
tcgctcgcttttgacacgatttttgcggaaggtcagcgccgctacgtcgagagtttgtcc
gcttacgcccgacagttcctgggccaggtggacaagccagatgtggacgccattgagggg
ctgtctcctgcgatttcgatcgatcagaaatccaccagccacaacccccgctccaccgtc
ggaacggtcacggaaatccaggactacctgcgcctgttgttcggccgcgctggtgagccc
cattgcccgcagtgtgatcgctcgatccgtcctcagagcatcgacgagatggtcgatcag
atcctggtgctgccggagggcacccgctatcagctgctggctcccgtggttcggggcaag
aagggcacccacaccaagatgatcagcggcctcgctgctgagggcttcgcccgggtacgc
atcgatggcgaggtccgcgagctggcggacaacatcgaattggacaagaaccacgcccac
aatatcgaagtggtggtggatcggctggtggcccgcgacggcattcaggaacgtctcacc
gattcattgcgcaccgttctcaaacggggggatggactcgccctggttgaagttgtgccg
aagaagggagaggagctccccgatggtgtggagcgagagcgcctttattccgaaaaattc
gcttgcccggtccatggcgcggtcatggaggagttgtccccgaggttgttctcgttcaat
agcccctatggggcctgtgaggcctgccacggcatcggtcatctgcggaaattcactgtg
gatcgggtcattccagatcccactcagccggtgtattcggcggttgctccctgggcggaa
aaggacaacagctattacttctccttgctctattccgtgggagaggcctttggcttcgag
atcaagactccatggaaccagctcaccgatgagcaacgtgatgtgttgctgcacggcagt
cgcgaaccgatcctgattcaggccgatagccgttaccgcaagggcaaggcgggctacaac
cggccttttgagggaatcctgccgatccttgagcgtcagctgcgtgacgccagcggagag
gcccagcgtcagaagctggagaaatttcttgagttggtcccgtgcgaggcctgcgccggt
cagcggctgcggccggaagccctcgccgtgaaggtgggccctttctgcattcctgagctg
acggccgtcagcgttggtcagacccttgaccgcatcgagcagttgatgggggttggcagc
catgagggtgccaacccattgctgaatgatcgccagattcagatcggtgatctggtgctg
cgggagatccggctgaggttgaagtttctgttggatgtggggctcgactacctgagcctg
gatcggccggcgatgacgctgtccggtggagaagcgcagcggatccgtctggccactcag
atcggtgccggtctcaccggtgttctgtatgtgctcgatgagccgagtatcggtctgcac
cagcgggacaacgatcgtttgctgaacaccctcgtgcgcctgagagacctgggcaacacg
ctggtggtggttgagcacgacgaagacaccatccgtgctgccgatcacgtggtggatatc
ggccctggcgcgggcgtgcatgggggccacatcgtggcggaaggcagtttcgaagatctg
atcaacagcgaagcgtcgctgaccggtgcctacctcagcggtcgccgctcgattccgaca
ccggcggaacgacgccagagcggtacccgttcgctcaagttgctcgattgcaaccgcaac
aacctcaagaacgtcagtgtggagtttcccctcggtcggctggtgtccgtcaccggggtg
agcggcagcggcaagagcaccttggtgaatgaattgctccaccctgcactcgagaacggc
ctggggatgaaggttccctttccgcagggactcgctgaattgcgggggttgaagtcaatc
gacaaggtgatcgtgattgaccagtcaccgatcggtcgcacgccacgctccaatcccgcc
acttacaccggtgctttcgacccgatccgtcaggtgtttgctgccacggtggaggccaag
gcccgcggctatcaggtggggcaattcagcttcaacgtgaagggcggtcgctgtgaggct
tgccgcggtcagggcgtgaacgtgatcgagatgaatttcctgcctgatgtctacgtccag
tgcgacgtctgtaagggagcacgcttcaaccgggagacgttgcaggtgaaatacaagggg
tacaccattgccgatgtgctgcagatgacggtggagcaggccgccgaagtgttcgacgca
attcctcaggctgcggatcgattgcgcacgttggtggatgtcggcctcggttacgtgaag
cttggccagccagctccgaccctctccggtggagaagcgcagcgggtgaaattggcgact
gagttgtcacgcagggcgacggggaaaaccctttatctgattgatgaacccaccacgggt
ctgagtttttacgacgtccataaattgatggatgtaatgcagcgccttgttgataagggc
aactcgattatctgtattgagcacaatttggatgtgattcgctgttccgattggatcatt
gatctcggacccgagggtggcgacaagggtggagagcttctggtgaccgggaccccggaa
gaggttgcccagcatccaaccagtcacacaggcagataccttgctcgtgttttggagcag
catccgccagagatcccactgatcgctgcctga
DBGET
integrated database retrieval system
