Synechococcus sp. SynAce01: BM449_03775
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Entry
BM449_03775 CDS
T08413
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
syny
Synechococcus sp. SynAce01
Pathway
syny03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
syny00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BM449_03775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syny03019
]
BM449_03775
03016 Transfer RNA biogenesis [BR:
syny03016
]
BM449_03775
Enzymes [BR:
syny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BM449_03775
Messenger RNA biogenesis [BR:
syny03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BM449_03775
Transfer RNA biogenesis [BR:
syny03016
]
Prokaryotic type
tRNA degradation factors
BM449_03775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
S1_RRP5
OB_RRP5_4th
PCB_OB
TOBE_2
Phage_TAC_11
KH_KhpA-B
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
APD47562
LinkDB
All DBs
Position
740388..742508
Genome browser
AA seq
706 aa
AA seq
DB search
MPGKIQSVSFDGREIRLTTGLFAPQAGGAVLVECGDTSVLVTATRAKGREGIDFLPLTCD
YEERLYAAGRIPGSFFRREGRPPERAILTTRLIDRPMRPLFPSWLRDDLQVVATCLSLDE
RVPPDVLAVTGASIATLLAKIPFNGPMAAVRVGLLGDDFVLNPSYREIERSELDLVVAGT
PSGVVMVEAGANQLPEQDVIEAIDFGYEAVGELIKAQQTLLADLGIEQVFPEAQVLDAAL
PNFLEQECGAGIGEVLKQFSLTKAERDAQLDVIKAGVAQKIAGLSDDDPIRLAATGKALG
NTYKGITKKLMRAQILSEGKRVDGRNLDEVRPITAAVGVLPKRVHGSGLFQRGLTQVLSC
ATLGTPSDAQEMDDLNPMGEKTYLHHYNFPPYSVGETRPMRSPGRREVGHGALAERALIP
VLPAKEGFPYVMRVVSECLSSNGSTSMGSVCGSTLALMDAGVPLKAPVSGAAMGLIKEGD
EVRILTDIQGIEDFLGDMDFKVAGTEKGITALQMDMKMSGLAVKTIAEAVNQARPARLHI
LEKMLEAIEKPREILSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIEDGG
IVTIASHDGAAAEEAQRIIEGLTRRISEGEQFSGTVTRVIPIGAFVEILPGKEGMIHISQ
LSEARVEKVEDVIKVGDAVTVRVREIDNRGRINLTLRGVSQEPVAV
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtgccaggaaaaattcagtcggtctccttcgatggtcgggagatccggctgaccacaggg
ttgtttgcccctcaagcaggcggggccgtgttagttgaatgtggtgatacgtccgtgctg
gtcacggccaccagggccaagggtcgcgaagggatcgatttcctccccctcacctgcgac
tacgaagagcgtctctacgccgccggacgcatccccggcagcttcttccgccgcgaaggc
cgcccccccgagcgcgccatcctcaccacgcgcctgatcgaccgcccgatgcggccgctg
tttccctcctggctacgggacgacctccaggtggtcgccacatgcctgtcgctggatgaa
cgggtcccgcccgatgtgctcgccgtgaccggcgcctcgatcgccaccctgctggccaaa
atccccttcaacggcccgatggcggccgtgcgcgtcggcctgcttggcgacgacttcgtg
ctcaaccccagctaccgcgagatcgagcgcagtgagctggatctggtggtggccggcacc
ccgtccggggtggtgatggttgaagcgggcgccaaccagctgcccgaacaagacgtgatc
gaagcgatcgacttcggctacgaagccgtgggcgagctgatcaaggcccaacagaccctc
ctcgccgacctgggcatcgagcaggtattcccggaagcgcaggtgctcgacgccgccctg
ccgaatttcctggagcaggaatgcggcgccggcatcggcgaagtgctcaagcagttcagc
ctcaccaaggcggagcgcgacgcccagctcgatgtgatcaaggcaggcgtggcccagaag
attgccggtctctccgacgacgatccgatccgcctggccgccaccggcaaggccctcggc
aacacctacaagggcatcaccaagaagctgatgcgcgcccagatcctcagcgagggcaag
cgggtcgatggccgcaacctcgatgaagtgcggccgatcacggcggccgtcggcgtgctg
cccaagcgggtgcatggctccggcctcttccagcgcgggctcacccaggtgctctcctgc
gccaccctcggcacccccagcgatgcccaggagatggacgacctcaacccgatgggcgag
aagacctatctccaccactacaacttccccccctattccgtcggcgaaacccggccgatg
cgctcccccggccgccgcgaagtcggccacggcgccctcgccgagcgggccctgattccc
gtgcttcccgccaaggagggcttcccttacgtgatgcgggtcgtctcggagtgcctcagc
tccaacggctccacctcgatgggctcggtctgcggcagcaccctggcgctgatggatgcc
ggtgtgccgctcaaggctcccgtaagcggcgccgccatgggcctgatcaaggagggtgat
gaggtgcgcatcctcaccgacatccagggcatcgaggatttcctcggcgacatggacttc
aaggtggccggcaccgagaagggcatcaccgccctgcagatggacatgaaaatgtccggt
ctggcggtgaagaccatcgccgaagccgtcaaccaggcccgcccggcccggctgcacatc
ctcgagaagatgctggaggcaatcgagaagccccgtgagatcctctcgccgcatgccccg
cggctgctcagcttccgcatcgatcccgagctgatcggcacggtgatcggccccggtggg
cgcacgatcaagggcatcaccgagcgcaccaacaccaagatcgacatcgaggatggcggc
atcgtcacgatcgccagccacgacggcgccgccgccgaggaagcccagcggatcatcgag
gggctgacccgccggatcagtgaaggcgagcagttcagcggcacggtcacccgggtgatc
ccgatcggcgccttcgtggagatcctccccggcaaggaagggatgatccacatctcccag
ctctccgaagccagggtcgagaaggtggaagacgtgatcaaggtgggcgatgccgtcacc
gtgcgggtgcgcgagatcgacaaccgcggtcgtatcaacctcaccctgcgcggtgtgtcc
caggaacccgtggcggtctga
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