Synechococcus sp. SynAce01: BM449_04055
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Entry
BM449_04055 CDS
T08413
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
syny
Synechococcus sp. SynAce01
Pathway
syny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
syny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BM449_04055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syny03400
]
BM449_04055
Enzymes [BR:
syny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BM449_04055
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BM449_04055
DNA repair and recombination proteins [BR:
syny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BM449_04055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Auto_anti-p27
PknG_rubred
DUF2688
Motif
Other DBs
NCBI-ProteinID:
APD47598
UniProt:
A0A1J0P8R7
LinkDB
All DBs
Position
794187..795035
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AA seq
282 aa
AA seq
DB search
MPELPEVETVRRGLERQLNNAFEIDRVEVLRARAIAAPADVDQFRAGLIGCLVGTWSRRG
KYLMAELSRGGQAAGHWGVHLRMTGQFLWLDQPRDPCRHTRVRCWNRQGQELRFIDVRSF
GQMWFIPSGQACSSVMTGLQKLGPEPFSSGFNGPYLQQKLKGSVRPIKAALLDQALVAGV
GNIYADESLFNAGVAPQRRSGSLSPAELERLCQSLIEVLEISIGSGGTTFSDFRDLSGTN
GNYGGVAWVYRRSGQPCRRCGQPIQRLRLAGRSSHWCPNCQH
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactccctgaggtggaaaccgtgcgccgcgggctggagcgccagctcaacaac
gccttcgagatcgacagggtcgaggtgctgcgggcacgcgccatcgccgcgcccgcagat
gtcgatcagttccgtgccgggctgatcggttgcctggtgggcacctggagccgccgcggc
aaatacctgatggccgagctgagccgcggcggccaggcggcaggccactggggcgtgcat
ttgcgcatgaccggccaatttctctggctggatcaaccccgcgacccctgccgccacacc
cgggtgcgctgctggaaccgccaggggcaggaattgcgcttcatcgacgtgcgcagcttc
ggccagatgtggttcatcccctccggccaggcttgctccagcgtgatgacgggcctgcag
aagctgggccccgaacccttcagctcaggcttcaacggcccctacctgcagcagaaactc
aaaggctccgtccgcccaatcaaggccgccctgctcgaccaggcgctggtggctggcgtc
ggcaacatctacgccgatgaatccctcttcaacgcaggcgtggccccccagcgccgcagc
ggcagcctcagccccgcagagctcgagcggctatgccaatcactgatcgaggtgctcgag
atcagcatcggctcaggtggcaccaccttcagcgacttccgcgatctcagcggcaccaat
ggcaactacggcggcgtcgcctgggtctatcgccgcagcggccaaccctgccgccgctgc
ggccaaccgatccagcgcctgcgcctggcaggacgcagcagccactggtgccccaactgc
cagcattga
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