Synechococcus sp. SynAce01: BM449_06505
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Entry
BM449_06505 CDS
T08413
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
syny
Synechococcus sp. SynAce01
Brite
KEGG Orthology (KO) [BR:
syny00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BM449_06505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syny03021
]
BM449_06505
Transcription machinery [BR:
syny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BM449_06505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
APD47966
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All DBs
Position
1277055..1278032
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AA seq
325 aa
AA seq
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MGTPPRLTAANADKGDDDKPSAKVGQSRTSGRLSADSIGWYLSTIGRVPLLTAAEEIELA
HHVQGMKVLQALPPDTLTRRQHHQIRMGTRARTRMMAANLRLVVSVAKKYQNQGLDLMDL
VQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTIRLPIHVSEKLSKMR
RITRELSHRFGRQPNRLEMAHAMGIEPKDLEDLITQSAPCASLDAHARGDEDRSTLGELI
PDPASNEPMDSMDRSLQKEHLGAWLSQLNEREQKILKLRFGLEGAEPLTLAEIGRTINVS
RERVRQLEAKAIMKLRLMSSYQQAA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggggacacctccgagactcacggctgcaaacgcagacaagggtgatgacgacaagccg
tcagccaaagtgggtcagtcacggacgagtggacggttaagcgccgattcgattggctgg
tatctcagcacgatcggtcgggtacccctgctcacggcggcggaagaaatcgagctggcc
catcatgtccaaggtatgaaggtgctgcaagcccttccccccgacaccctcacccggcgc
cagcaccatcagattcggatgggcacgcgcgcccgcacccggatgatggccgccaacttg
cgtctggtggtcagcgtggccaagaaatatcagaaccagggtctcgatctgatggatctc
gtgcaggaaggggcgatcggcctcgagcgtgccgtcgataagttcgatcccgccatgggc
tacaaattttccacctacgcctattggtggatccgccagggcatgacccgggcaatcgac
aacagcgcccgcacgatccgcctgccgattcacgtcagtgaaaagctctcgaagatgcgg
cggatcacccgtgagctctcccatcgtttcgggcgccaacccaaccgactcgaaatggcc
catgccatgggcatcgagcccaaggacctggaggatctgatcacccagagcgctccttgc
gcctcccttgatgcccacgcccgcggcgacgaagaccgcagcaccctgggagaactgatt
ccggatccggccagcaacgagccgatggattcaatggatcgcagcctccagaaggagcac
ttaggcgcctggctgtcccagctcaatgaacgggaacagaagatcctcaagctgcgcttc
ggtctggagggcgccgagcccctcaccctcgcggagatcggtcgcacgatcaatgtctcg
cgcgagcgggtgcggcagctcgaagccaaggcgatcatgaagttgcggctgatgagcagc
taccagcaggccgcctga
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