Synechococcus sp. CBW1002: H8F24_00420
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Entry
H8F24_00420 CDS
T10440
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H8F24_00420 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_00420 (priA)
Enzymes [BR:
synz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
H8F24_00420 (priA)
DNA repair and recombination proteins [BR:
synz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H8F24_00420 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
ResIII
Helicase_C
PriA_3primeBD
Zn_ribbon_PriA
AAA_30
zf-CHY
AAA_25
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QPN61397
LinkDB
All DBs
Position
complement(82593..84875)
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AA seq
760 aa
AA seq
DB search
MSVFDAPDLVHGFVQVWLEAGREGQVFTYANPDRLVLGPGDLVAVRLQGRRHGGLVVETL
VEVPPELLGRTLEPVLELLQPAAVDPRWRAWIAQVADQCHTSLFRTLKSALPAGWLGQRR
KTSLSRASVGAAARALARSWVALPAEHPAAPVSTTERQGRLLQALAEGGGQLPLTALQAV
EGCSPAVLRTLERRGLLRRCPPPASSSSDDPGGHRLTPAQQEAVAAIEAAAPAQALLLWG
VTGAGKTEVYLQAAAACLARGESVLLLAPEIGLIPQLLDRCRQRFGAQVLEYHSGMGDAE
RVRVWRSCLEAAAEPVALVAVGTRSAVFLPLPRLGLIVLDEEHDDSYKQESPMPCYHARD
VARLRLSGSGARLVLGSATPSLETWLRCQGEAADTRLLRLPERIGARPLPPVRVVDMRME
LVEGHRRLLSRALMGRLQTLQERGEQAVVLVPRRGYRSFLSCRSCGEVVLCPHCDVALTV
HRSARADGAGHEWLRCHWCDHRSPISHRCGHCGSTAFKPFGAGTQRVMEQLAAELEGLRV
LRFDRDTTRGRDGHRRLLERFAAGDADVLVGTQMLAKGMDLPRVTLAAVLAADGLLHRPD
LRSSELSLQLLLQLAGRAGRGERPGEVLVQTYCPEHPVIRHLVDGRYEQFLVEELALRRQ
AGLVPFSRACLLRLAGPSATATATAASALAEHLRPTLLTAGWMLVGPAPAPVARVAGRSR
WQLLLHGPAGTPLPLPSEAELRQTLPAGVSLAIDPDPLSL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
ctgtccgtttttgacgcccctgatctggtgcacggcttcgtgcaggtgtggctcgaggcc
ggtcgggaggggcaggtgttcacctatgccaatcccgatcggctcgttctggggccaggg
gatctggtggcggtacgcctgcagggtcggcgtcatggcggtctggtggtggagaccctc
gtcgaggttccccccgagcttctgggccgcaccctggagccggtgctggagctgctgcag
cctgccgccgtagacccacgctggcgtgcctggatcgcccaggtggccgatcagtgccac
accagtctgttccgaaccctcaagagcgctttgccggccggctggctgggccagcgccgc
aagacttcgctcagccgtgcctcggtgggggccgccgcccgggccctggcacgcagctgg
gtcgcgttgccggccgagcatccggctgctcctgtttccaccaccgaacggcagggccgt
ttgctgcaggccttggccgaggggggaggccagttgccactgacggccctccaggcggtg
gagggctgttcgccggcggttctgcgcaccctggagcggcggggattgctgcgccgttgc
ccaccgcctgcctcgtcttcgtccgatgaccccggcgggcatcggctgacgccggcccag
caggaggccgtcgcggcgatcgaagcggcggcccctgcccaggccctgctgctctggggt
gtgacgggggccggcaagaccgaggtctatctgcaggcggcggccgcctgcctggccagg
ggggagagcgtgctgctgctggccccggagatcggcctgatcccccagttgctggaccgt
tgccgccagcggttcggcgcgcaggtgctcgaatatcacagcggcatgggcgacgccgag
cgggtgcgggtttggcggagctgtctggaggcggctgccgagcccgtggccctggtggcg
gtgggaacccgctcggcggtgtttctgccgctgccccgtctcggtttgatcgtgctggat
gaggagcacgacgactcctacaagcaggagagtccgatgccctgctatcacgcccgcgat
gtggcccggctgcggctgtctggctctggtgcgcggctggtgctcggcagtgccacgccg
tcgctggaaacctggctgcgctgccagggcgaggccgccgacacccggctgttgcgcctg
cccgagcggatcggggcccggccgctgccgcccgtgcgggtggtggacatgcggatggag
ctggtcgaggggcatcgacgcctgctcagccgggccctgatggggcgtctgcagaccttg
caggaacgcggtgaacaggccgtggtgctggtgccgcggcgtggctaccgctcctttctc
agttgccgcagttgcggtgaggtggtgctctgcccccactgcgacgtggccctcaccgtg
caccgcagtgcccgtgccgatggcgccggccatgagtggctccgctgccactggtgcgat
caccgcagcccgatcagccatcgctgcggccattgcggttccactgccttcaagcccttc
ggtgccggcacccagcgggtgatggagcagctggccgctgagctcgagggcctgcgggtg
ctgcgtttcgatcgggacaccacccgcggccgcgacggtcaccgccgcctgctcgagcgc
ttcgccgccggtgacgccgacgtgctggtgggcacccagatgctggccaaggggatggat
cttccgcgggtcaccctggcggcggtgttggccgccgatgggctgctgcatcgccccgat
ctgcgttccagcgagctgagcctgcagttgctgctgcagctggccggccgggccggccgt
ggtgagcgacccggcgaggtgctggtgcagacctactgcccggagcatccggtgatccgg
cacctggtggatgggcgctacgagcagtttctggtcgaggagctggccctgcgccgccag
gcgggcctggtgccgttcagccgcgcctgcctgctgcgcctggccgggccgagcgccacg
gccacggccacggcagcctccgccctggccgagcatctgcgccccacactcctgacggcg
ggctggatgctggtggggcctgcgcctgctccagtcgcccgggtggcggggcgcagccgc
tggcaactgctcctgcatggaccggcgggcacacccttgcccctgccctccgaggcggag
ctccgccagaccctgccggccggggtgagcctggcgatcgatcccgaccccctcagcctc
tga
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