Synechococcus sp. CBW1002: H8F24_01770
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Entry
H8F24_01770 CDS
T10440
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H8F24_01770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_01770
Enzymes [BR:
synz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H8F24_01770
DNA repair and recombination proteins [BR:
synz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H8F24_01770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
RsgA_GTPase
nSTAND3
AAA_29
NTPase_1
MeaB
AAA_22
PIF1
NACHT
AAA_16
T2SSE
HHH_2
NPHP3_N
ABC_tran
AAA_28
AAA
UvrD-helicase
cobW
MobB
AAA_23
TsaE
ATP_bind_1
CbiA
MMR_HSR1
AAA_3
Herpes_Helicase
NB-ARC
Mg_chelatase
SLFN-g3_helicase
DEAD
AAA_14
RuvB_N
AAA_24
TrwB_AAD_bind
DUF815
ATPase_2
HHH
SMC_N
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QPN61423
UniProt:
A0A7T1HTE9
LinkDB
All DBs
Position
complement(368059..370359)
Genome browser
AA seq
766 aa
AA seq
DB search
MADTAAEPTEVLAGSIERVTFHNPSNGFCVLRIKARGHRELVTVVGHAAEISAGEWVTVS
GTWVNDREHGQQFKAAFLRSSPPTTAEGIERYLGSGMIRGIGPIYASKLVAVFGAEVFEV
IEQAPERLREVPGIGKVRAGRIAQAWADQKVVREIMVFLHSHGVGTARAVRIFKTYGNDA
VQVMAENPYRLARDIRGIGFRTADAIAARLGIEPTATIRLRAGINYALLEASGEGHCGLP
TAELLKLAGELLAVERPAAEPGADAGTTSRVPLEPVQIQSALDLELAEGAVVADSLAGEP
AIFLSHLHKAERQIAQALLELAQGAPPWGAIDAAKAIGWVEQRLGLQLAASQREAVQQAL
ASKVLVITGGPGVGKTTLINAILQILAAKKLRIQLCAPTGRAAKRMAEATGLEAKTIHRL
LEFDPASYGFRRGAELPLECDLLVVDETSMVDVPLMASLLAAIPPEAALLLVGDVDQLPS
VGPGQVLADAINSGALPVTRLTEVFRQAASSRIITTAHAINGGTIPDLRAPAEGVSSDFY
FLPAETPEQAVSLILKVVGERIPARFGLDPIAQVQVLCPMARGGCGSRSLNIELQKLLNP
DPPEHVERFGWRFAPGDKVMQIANDYEKEVFNGDVGTIDAIDSDNSELCVLFPTSEAGAA
GSRAVIYGWGELDTLVPAYACTIHKSQGSEYPAVVIPLLTQHYAMLQRNLVYTGLTRGKQ
LVVLVGQKKALAMAVKNHLGRRRYTKLAEWLTPGQLSPDMDYNHGS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgcagccgagcccaccgaggtgctggccggctcgatcgagcgggtcacc
ttccacaaccccagcaacggcttctgcgtgctgcgcatcaaggcgcgcggtcaccgcgag
ctggtgacggtggtgggccatgccgccgagatcagtgctggcgagtgggtcacggtgagt
ggcacctgggtgaatgaccgggagcacggccagcagttcaaggctgccttcctgcgctcc
tcaccgcccaccaccgccgaggggatcgagaggtacctgggctccgggatgatccgcggc
atcggcccgatctacgccagcaagctcgtggcggtcttcggggcggaggtgttcgaggtg
atcgaacaggcgccggagcggctgcgggaggtgcctggcatcggcaaggtgcgcgccggc
cggattgctcaggcctgggcggatcagaaggtggtgcgcgaaatcatggtgttcctgcac
agccatggcgtgggcactgcccgggcggtgcggatcttcaagacgtatgggaacgacgcc
gtgcaggtgatggcggagaacccctaccgcctggcgcgcgacatccgcggcatcggcttc
cgcaccgctgacgccatcgccgcccgcctcggcatcgaacccaccgccacgatccgcctg
cgggcggggatcaactacgccctgctggaggccagtggcgagggccactgcggcctgccc
accgccgagctgctcaagctggccggcgagctgctggcggtggagcggcccgccgctgag
ccgggtgccgatgccgggaccaccagccgcgtgcccctggagccggtccagatccaatca
gccctggatctcgagcttgcagaaggtgccgtggtggccgacagcctggcgggcgagccg
gcgatctttctgagccacctgcacaaagccgagcgccagattgcccaagcgctgctggag
ctggcgcagggggcaccgccctggggggccatcgacgcggccaaggcgatcggttgggtg
gagcagcgcctgggcctgcagctggccgccagccagcgggaagcggtgcagcaggccctg
gccagcaaggtgctggtgatcaccggcgggccgggagtcggcaagaccaccctgatcaac
gccatcctgcagatcctggcggccaagaagctgcgcatccagctctgcgctcccactggc
cgcgccgccaagcgcatggctgaggccacgggcctggaggcgaaaaccatccaccggctg
ctggagttcgaccccgccagctacggcttccggcgtggcgccgagttgccgctggagtgc
gacctgctggtggtggacgagacctcgatggtggatgtaccgctgatggcctcgctgctg
gcggcgatcccgccggaggcagcgctgctgctggtgggcgatgtggaccagctgccgtcg
gtgggtccagggcaggtgctggccgatgcgatcaacagcggtgcgctgccggtgacgcgg
ctcaccgaggtgtttcgccaggcggcatccagccggatcatcaccactgcccacgccatc
aacggcggcaccatccccgatctgcgggccccggccgagggcgtaagcagcgacttctac
ttcctgccggccgagacgcccgagcaggcggtatccctgatcctcaaggtggtgggcgag
cgcatcccggcgcgctttggcctcgatccgatcgcccaggtgcaggtgctctgcccgatg
gcgcgcggcggctgcggctcgcgctcgctgaacatcgagctgcagaagctgctcaaccca
gatccgcccgagcacgtggagcgctttggctggcggttcgcgccgggcgacaaggtgatg
cagatcgccaacgactacgagaaggaggtgttcaacggcgatgtgggcaccatcgatgcg
atcgactcagacaacagcgaattgtgcgtgctgttcccaaccagcgaggccggcgccgcc
ggcagccgggccgtgatctatggctggggagagctcgacaccctggtgccggcctacgcc
tgcacgatccacaagagccaaggcagcgagtacccagcggtggtgattccgctgctcacc
cagcactacgcgatgctgcagcggaaccttgtgtacacggggctcacccgcggcaagcag
ctggtggtgctggtgggccagaagaaggccctggccatggccgtgaagaaccacctgggc
cgcaggcgctataccaagttggcggagtggctcactccggggcagctttcaccggacatg
gattacaaccacggcagttga
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