Synechococcus sp. CBW1002: H8F24_03585
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Entry
H8F24_03585 CDS
T10440
Name
(GenBank) DEAD/DEAH box helicase
Organism
synz Synechococcus sp. CBW1002
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QPN60529
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Position
760989..764090
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AA seq
1033 aa
AA seq
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MSLLHATWLFPLEGSPVPAGVPTRGRLLLWADTWRVAKAVQPAAEAPEHPLTLNWDDLAT
WLQDNDFWSEAVRPASATLTLPSRRQAARGRRKSEEEGWSGLPLQAGEPIPKQVEWWPWQ
VEGLALDATAAAEWLSALPLSGQHPEMADELRWWSHLQRWSLSLIARGRWLPQVEGDMAR
WLPLLNREDDRRRLEELASRLPQVATCAMADTALACRRPGSGRLRVASLLEALLDGQLRS
GFTPASDGLDPLLLAWQKALGPGSGAVDLDGEAIERLEVATHHWREAVAGQVAPARACLE
LFTPAEGEELWELRFSLQAEVDPSLRLPAGAVWAAGDRPLQLGEIPVPQPGELLLEGLGR
ALQVFDPIERGLDEATPEAMQLTPAEAFVLVRTAADRLRDVGVGVVLPASLSGGLASRLG
LSIEAELPGKSRGFTLGEGLDWKWELMIGGVTLGLRDLERLTAKRSPLVQHKGAWIELRP
SDLRNAERFCAADPALSLDDALRLTATDGDTLMRLPVHRFEPGPRLKAVLEQYHQQKAPD
PLPAPEGFAGQLRPYQERGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQHLKAEQEL
KRPVLLVAPTSVLTNWKREAAAFTPELEVREHYGPRRPSSPAALKKALQGVDLVLTSYGL
LQRDSELLETLDWQGMVIDEAQAIKNPNAKQSQAARDLARPGKMGRFRIALTGTPVENRV
SELWALMDFLNPLVLGEEAFFRQRYRLPIERYGDMASLRDLKARVGPFILRRLKTDKSII
SDLPEKVELNEWVGLSSEQAKLYRKTVDDSLEAIARAPLGQKHGQVLALLTRLKQICNHP
ALALKEEGVDGQFASRSGKVQRLEEILEEVIEAGDRALLFTQFAEWGHLLQAHLERKWRQ
DVPFLYGNTSKAERQAMVDRFQEDPRGPQLFLLSLKAGGVGLNLTRASHVFHIDRWWNPA
VENQATDRAYRIGQQNRVLVHKFITSGSVEEKIDRMIREKSKMAEEIVGSGEDWLGGLEV
GQLRELVALSDDV
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacgccacctggctgtttcccctggagggatcacccgtacccgcggga
gttccgacccggggacggctgctgctctgggccgatacctggcgcgtggccaaggctgtc
caacccgccgctgaagcccccgaacacccgctcaccctcaactgggacgacctggccacc
tggctgcaggacaacgacttctggtctgaggcggtccgtccggccagcgccaccctcacc
ttgccgagccggcgccaggcggcccggggccgccgcaagagcgaggaggagggctggagc
gggctgccgctgcaagccggcgaaccgattccgaagcaggtggagtggtggccctggcag
gtggagggtctggccctcgatgccaccgccgccgccgagtggctcagtgccctgccgctg
tcgggccagcatcccgaaatggccgatgaactgcgctggtggagccacctgcagcgctgg
tcgctcagcctgatcgcccgtggccgctggctgccccaggtggagggcgacatggcgcgc
tggctgcccctgctcaaccgcgaggacgaccggcgccgcctcgaggaactggccagccgt
ctgccgcaggtggccacctgtgccatggcggacacggccctggcctgtcgccggcccggc
agtgggcgcctgcgggtggccagcctgctggaggccctgctcgatgggcagctgcgcagc
ggcttcacccccgccagcgacgggctggatccgctgctgctggcctggcagaaggccctg
ggcccgggcagcggcgccgtggacctcgacggcgaagccatcgagcgcctcgaggtggcc
acccaccactggcgcgaagccgtggcaggccaggtggcaccggcccgggcctgcctggaa
ctgttcaccccggcggagggagaggagctctgggagctgcgcttctccctgcaggcggaa
gtggacccaagcctccgcttgccggccggcgcggtctgggccgctggcgaccggcccctg
cagctgggcgagatcccggtgccacaacccggcgagctgctgctggagggcctgggccgc
gccctgcaggtgttcgatccgatcgaacggggtctggatgaggccacccccgaagcgatg
cagctcaccccggcggaagccttcgtgctggtgcgcaccgccgccgaccgcctgcgggac
gtgggggtgggggtggtgctgccggccagcctcagcggcggcctcgccagccggctgggt
ctctcgatcgaggcggagctgcccggcaaatcgcggggcttcaccctcggcgaggggctc
gactggaagtgggagctgatgatcggcggtgtcacgctcggcctgagggatctggagcgc
ctcacggccaagcgcagcccgctggtgcagcacaagggcgcctggatcgaactgcgcccc
agcgacctcaggaatgccgaacgcttctgcgccgcggatccggccctcagcctcgacgac
gccctgcgcctcaccgccacggatggcgacacgctgatgcggctgccggtgcaccgcttc
gagccgggcccacggctgaaggcggtgctggagcagtaccaccagcagaaggcgccggac
ccgctgccggcgccggagggcttcgccggtcagctacggccgtaccaggaacggggcctg
ggctggctcgccttcctgcatcgcttcgatcagggcgcctgcctggcggacgacatgggt
ctgggcaagaccatccagctgctggccttcctgcagcacctcaaggcggaacaggagctg
aagcggcccgtgctgctggtggcacccacctcggtgctgaccaactggaaacgggaggcc
gccgccttcaccccggaactggaggtgcgggagcactacggcccgcgccgcccctccagc
ccagcggccctgaagaaggccctgcagggcgtcgatctggtgctcaccagctacgggctg
ctgcaacgcgacagcgagctgctggagaccctcgactggcagggcatggtgatcgatgag
gcccaggcgatcaagaatccaaacgccaagcagagccaggcggcccgcgatctggcccgt
ccgggcaagatgggtcgcttccgcatcgccctcaccggcactccggtggaaaaccgcgtc
agcgagctctgggccctgatggattttctcaaccccctggtgctgggggaggaggccttc
ttccgccagcgctaccggctgccgatcgagcgttatggcgacatggcctccctgcgggac
ctgaaggcacgcgtggggccattcatcctgcggcgcctcaagaccgacaagtcgatcatt
tcggacctgccggagaaggtggagctgaacgaatgggtggggctgagcagcgagcaggcg
aagctttaccgcaaaacggtggacgacagcctcgaggcgatcgcccgcgcccccctgggc
cagaagcacggccaggtgcttgccctgctcacccgcttgaagcagatctgcaaccacccc
gccctggccctcaaggaagagggggtcgacgggcagttcgccagccgcagcggcaaggtg
caacggctggaggagattctcgaggaggtgatcgaagccggcgaccgcgctctgctgttc
acccagttcgccgaatggggtcatctgctgcaggcccatctggagcggaagtggcgccag
gatgtgcccttcctctatggcaacaccagcaaggcggagcgccaggcgatggtggatcgc
ttccaggaggatccccgcggaccgcagctgttcctactctccctcaaggctggcggcgtg
gggctcaacctcacccgcgccagccacgtgtttcatattgatcgctggtggaatcccgcc
gtggagaaccaggccacagaccgcgcctaccgcatcggacagcagaatcgggtgctggtg
cacaagttcatcaccagcggctcggtggaggaaaagatcgaccgcatgatccgcgagaaa
tcaaaaatggccgaggagatcgtgggctccggcgaagactggctcggcggcctggaggtg
ggacagctgcgcgaactggtggccctgagcgacgacgtctga
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