Synechococcus sp. CBW1002: H8F24_04890
Help
Entry
H8F24_04890 CDS
T10440
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
synz Synechococcus sp. CBW1002
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_04890
Enzymes [BR:
synz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
H8F24_04890
DNA repair and recombination proteins [BR:
synz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
H8F24_04890
Prokaryotic type
H8F24_04890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QPN60729
UniProt:
A0A7T1HS73
LinkDB
All DBs
Position
complement(1034901..1036358)
Genome browser
AA seq
485 aa
AA seq
DB search
MDARAPHATATAHGDLPRKFASRAALVQALRPLLLSPASGLSPIRGGRAAAERRLAAIDP
GAYGRSRNALDGAVTRLSPYIRHGVLTLAEVRDAVFAWLETSGAPRAAAAKLIAELGWRD
YWQRLWHQLGDGIWHDREPLKTGHPAASYAAVLPADIQEGSTGLTCIDAFAAELIGSGWL
HNHARLWLASYVVHWRRVRWQAGAQWFLQHLLDGDPASNALSWQWVASSFSSKPYIFNRA
NLERYGGQSLCARCPAARRGGPDVAGGCPFDADYEQLQQQLFPWATEAPPASAPAPQTPS
PPPPAPEPSTASASGLAVSAGPLAPTGTSRPNPDPPQRPVLWIHGEALGPANPALRAYPG
RPALFVFDSAWLTGTTTSGPPPSLKRLGFLAECLVELPVTIRHGDPAAELLAFAQRHGAD
GIVTSAAVDPRLAAIQAQLAGALPLTVLPPEPFVVLEQAVDLGRFSRYWRRAEARVWAAA
GRGRP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttggacgcgcgcgcgccccatgccaccgccaccgcacacggcgacctgccccgcaagttc
gcctccagggccgccctggtacaggcgctgcggcccctgctcctcagccccgccagtggc
ctgagcccaatccgtggcggtcgagccgcggccgagcggcgcctggcggcgatcgatcca
ggggcctatggccgcagccgcaatgccctcgatggcgccgtcacgcgcctgtcgccctac
atccgccacggcgtgctcaccctggccgaggtgcgcgacgcggtgttcgcctggctggag
accagcggtgccccccgcgccgccgccgccaagctgatcgccgagctgggctggcgcgac
tactggcaacgcctctggcaccagctgggcgacggcatctggcacgaccgcgaaccgctc
aagaccggccaccccgccgccagctacgccgccgtgctgccagccgacatccaagagggc
agcaccggcctgacctgcatcgatgcctttgcggccgagctgatcggcagcggctggctg
cacaaccacgcccgcctctggctggcctcctatgtggtgcactggcgccgggtgcgctgg
caggccggtgcccagtggttcctgcagcacctgctggatggcgaccccgccagtaacgcc
ctcagctggcagtgggtggccagcagcttcagcagcaagccctacatcttcaaccgggcc
aacctggagcgctacggcggccagagcctctgcgcccgctgtcctgccgcccgccgcggc
ggcccggatgtcgccggaggctgtcccttcgacgccgactacgagcagctgcagcagcag
ttgttcccatgggccactgaggcgccgccggcttcagctccggctccgcaaactcccagc
cctccacccccggcgccagagccttccactgcctctgcctccggcctcgccgtttcagct
ggaccgctggcgcccacgggcaccagccgccccaatccggatccaccccagcgaccggtc
ctctggatccacggcgaagccctcggccccgccaaccccgccctgcgggcctacccgggc
cggccggccctgttcgtcttcgacagcgcctggctgaccggcaccacaaccagcggcccg
ccccccagcctgaagcggcttggctttctggcggagtgcctggtggagctgccggtcacg
atccgccacggcgacccagcggccgagctgctggcgttcgcgcaacgtcacggcgccgat
gggatcgtcaccagcgccgccgtggacccgcgcctcgcggcgatccaggcccagctcgcc
ggcgctttgcctctcacggtgctgccgcccgagcctttcgttgtactcgagcaggcggtg
gatctggggcgcttcagccgctactggcgccgcgccgaggcgagggtctgggccgccgct
ggccgcggaaggccctga
DBGET
integrated database retrieval system
