Synechococcus sp. CBW1002: H8F24_06100
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Entry
H8F24_06100 CDS
T10440
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz00260
Glycine, serine and threonine metabolism
synz00630
Glyoxylate and dicarboxylate metabolism
synz00670
One carbon pool by folate
synz00785
Lipoic acid metabolism
synz01100
Metabolic pathways
synz01110
Biosynthesis of secondary metabolites
synz01200
Carbon metabolism
Module
synz_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
H8F24_06100 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
H8F24_06100 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
H8F24_06100 (gcvP)
00670 One carbon pool by folate
H8F24_06100 (gcvP)
Enzymes [BR:
synz01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
H8F24_06100 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
QPN60911
UniProt:
A0A7T1HSF9
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Position
complement(1277017..1280031)
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AA seq
1004 aa
AA seq
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MSTDFLERHLGPGPWEQQRMLEELGLPSLDALTASVVPADILLPEAEASEGLPTGCGEAE
ALKELATIAAANQMHRSLIGLGYHGTATPALIQRHVLENPCWYTAYTPYQAEIAQGRLEA
LLNFQTLVSELTGLPIANASLLDEATAAAEAMALALAVCKRPEAHRFLVDRAVLPQTLAV
LQTRAEPLGIRLELIDAAGWRGDGSSALAADLFSADLFAADVFGLVLQLPGSDGRLWDPT
ALLAAARAAGVISTVAIDPLAQVLLEPVGDLGADIAVGSLQRFGVPMMGGGPHAAFFATR
DAYKRQIPGRLVGQSLDTEGRPALRLALQTREQHIRRDKATSNICTAQVLLAVMASFYAV
HHGPEGLTAIARRIVTLRARLAAGLGAIGLPPEPGTGFDTLVVHSPDAAALLDRAAGAGF
NLRAGIDGSGVASGAAPTGAMPAVAISLDELSSEAEVERLLAALADPDAAATPAMPAEAS
ATKPGQATASPGTTGNPEPPALASLLPDLPLRHRPWLTQEVFHCYRSETELLRYIQRLAS
KDLSLVHGMIPLGSCTMKLNAAAELAPVSWPAFSQLHPFAPAEQLAGSRRLVDDLARWLA
AITGFAGVSLQPNAGSQGEYAGLLVIRAWHASRGEQHRNVCLIPTSAHGTNPASAVMAGL
RVVAVACDSDGNIDLTDLEAKASAHAGELAALMVTYPSTHGVFETGIRRICDLVHEHGGQ
VYLDGANLNAQVGLCKPGLYGADVCHLNLHKTFCIPHGGGGPGVGPIGVAAHLVPFLPGH
PLAACGGTAAIGPVSAAPWGSAGILPISWMYIRMMGGAGLRRASQVALLAANLIAERLDA
HFPVLYRGANGRVAHECILDLRPLKRSIGLEVDDLAKRLMDYGFHAPTVSWPVAGTVMVE
PTESEALAEIDRFCAAMVAIRAEAAAIESGDADRLDNPLKRAPHTLAVVTADSWERPYSR
SQAAFPAGPQQRENKFWPAVSRIDNAYGDRHLVCTCPTVEELAS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
gtgagcacggacttcctggagcgtcatctcggtccggggccctgggagcaacagcgcatg
ctcgaggagctcggcctgccgagcctggacgcgctgacggcctccgtggtgccggccgac
atcctgctgccggaggcggaggcctccgaaggcctgccgaccggctgcggcgaagccgag
gccctgaaggagttggcaacgatcgccgcggccaatcagatgcatcgcagcctgatcggc
ctggggtatcacggcacggccacgccggctctgatccagcgtcacgtgctggagaacccc
tgctggtacaccgcctacaccccgtatcaggcggagatcgcccagggccgcctcgaagcc
ctgctcaacttccagaccctggtgagcgagctcaccgggctgccgatcgccaacgcctcg
ctgctggatgaggccaccgccgccgccgaggcgatggccctggcgctggcggtctgcaag
cgaccggaggcccaccgcttcctggtggaccgggccgtgctgccccagaccctggcggtg
ctgcagacgcgggccgaaccgctcggcatccgcctggagctgatcgacgcggcaggctgg
cggggtgacgggtcatcagcgctcgcagctgatctcttctcggccgatctcttcgcagcc
gatgtcttcggcctggtgctgcagctgcccggcagcgacggccgcctctgggaccccacg
gccctgctggccgccgcccgggcggcgggggtgatcagcaccgtggcgatcgatccgctg
gcccaggtgctgctggagccggtcggcgacctgggggcggacatcgccgtgggcagcctg
cagcgcttcggtgttccgatgatgggcggcggcccccacgccgctttcttcgccacccgc
gacgcctacaaacgccagattcccggccgtttggtgggacagtcgctcgatacggagggc
cggccggccctgcggctggcgctgcagacccgtgagcagcacatccgccgcgacaaggcc
accagcaacatctgcaccgctcaggtgctgctggcggtgatggccagcttctacgccgtg
caccacggccccgaagggctcaccgcgatcgcccggcggatcgtgacgctgcgggcccgc
ttagccgcgggcctgggcgcgatcggcctgccgccggaacccggcaccggcttcgacacc
ctggtggtgcacagtcccgacgccgccgccttgctggatcgggcggccggagccggcttc
aacctgcgggccggcatcgacggcagcggtgtggcgtcaggggccgcgccgacaggagcc
atgccagccgtggccatcagcctcgatgagctcagcagcgaggctgaagtcgagcgcctg
ctggccgccctggccgatccggatgcggccgccacaccagccatgccggcggaggcctcc
gccaccaagccaggccaggccacggccagccccggcacaaccggcaaccctgagccccct
gcgctcgccagcctgctgccggatctgcccctgcgccaccgcccctggctgacccaggag
gtgttccactgctaccgcagcgaaacggagttgctccgctacatccagcgcctcgccagc
aaggatctctccctggtgcacggcatgatcccgctgggcagctgcaccatgaagctgaac
gccgcggcggaactggcgcctgtcagctggcccgccttcagccagctccatccgttcgca
ccggccgagcagctggccggcagccgccggctggtggacgacctggcgcgctggctggcg
gcgatcacgggcttcgccggggtgtcgctgcagcccaatgccggctcccagggggaatac
gccggactgctggtgatccgggcctggcatgccagccgcggcgagcagcaccgcaacgtc
tgcctgattcccaccagcgcccacggcaccaacccggccagtgcggtgatggcgggtctg
cgggtggtggccgtcgcctgcgactccgacggcaatatcgacctcaccgacctggaggcc
aaggcctcggcccacgccggcgagctggcggccctgatggtcacctatccctccacccac
ggtgtcttcgagaccggcatccgccgcatctgtgacctggtgcatgagcacggcggccag
gtctatctcgacggcgccaacctcaacgcccaggtggggctgtgcaagccggggctctac
ggcgccgacgtctgccacctcaacctccacaagaccttctgcattccccatggcggcggt
ggacccggcgtgggcccgatcggcgtggccgcccatctggtgccgtttctgcccggccat
cccctggcggcctgcggcggcacagcggcgatcggcccggtgagcgccgccccctggggc
agcgccggcatcctgccgatcagctggatgtacatccggatgatggggggagccggcctg
cgccgcgccagccaggtggccctgctggcggcgaacctgatcgccgagcgactggatgcc
catttcccggtgctctaccgcggtgccaacggccgcgtcgcccatgaatgcatcctcgac
ctgcggccactgaaacgctcgatcgggctggaggtcgacgacctggccaagcggctgatg
gactacggcttccatgcccccaccgtgagctggcccgtggccggcacggtgatggtggag
cccaccgaaagcgaggcgctggcggagatcgaccgcttctgcgccgccatggtggcgatc
cgcgccgaggcggccgcgatcgagagcggcgacgccgaccggctcgacaacccgctcaag
cgggcgccccacaccctggccgtggtgaccgccgacagctgggagcggccctacagccgc
agccaggcggcctttccggccggcccccagcaacgggagaacaagttctggccggctgtc
tcccggatcgacaatgcctacggcgatcgccatctggtgtgcacctgcccgacagttgag
gaactggcctcctga
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