Synechococcus sp. CBW1002: H8F24_06575
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Entry
H8F24_06575 CDS
T10440
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz03030
DNA replication
synz03430
Mismatch repair
synz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
H8F24_06575 (holA)
03430 Mismatch repair
H8F24_06575 (holA)
03440 Homologous recombination
H8F24_06575 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synz03032
]
H8F24_06575 (holA)
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_06575 (holA)
Enzymes [BR:
synz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
H8F24_06575 (holA)
DNA replication proteins [BR:
synz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
H8F24_06575 (holA)
DNA repair and recombination proteins [BR:
synz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
H8F24_06575 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
AhpC-TSA
Motif
Other DBs
NCBI-ProteinID:
QPN60983
LinkDB
All DBs
Position
1385135..1386157
Genome browser
AA seq
340 aa
AA seq
DB search
MPIHLYWGDDEAARQRAVEALVTELVDPAWASINLSRLDGNDSGQAARALEDARTPPFGS
GARLVVLQRSPFTSQCPAELAAQMEACLELVPETCHLLLVSSNKPDARLRLTKALKAVAR
ERSFTLPAAWDGAGQLDLVTRTAHELGLSLEPGAAEALCEAIGSDSARLASELEKLALYA
GAAPGSSAATPTARPINVAAVQALIGSHATTSLAVGDALLAGRPADAIALVDNLLEVNEP
ALRIVAALTSQIRGWLWVSLLDKTGETDVATIAKAAGIGNPKRIYVMRKQLRGRGPGPLL
KLLSQLLEVEAALKRGATPGDAFRDGFLLAGGIALDHAGR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccatctctactggggcgacgatgaagccgcccgccagcgggccgtggaggcc
ctggtgactgagctggtggatccggcctgggcttcgatcaacctcagccgcctcgatggc
aacgactccggccaggccgcccgggccctggaagacgcacgcaccccgcccttcggcagc
ggagcgcggctggtggtgctgcagcgcagccccttcaccagccagtgtccggcggagctg
gcggcccagatggaggcctgcctggagctggttcccgagacctgccacctgctgctggtg
agcagcaacaaacccgacgcccgcctgcgcctcaccaaggccctcaaggcggtggcccgg
gaacggagcttcaccctgccggccgcctgggacggggccggccagctggatctggtgacc
cgcacggcccacgaactcggcctgagcctggagccgggcgccgccgaggccctgtgcgag
gcgatcggcagcgacagcgcccggctggccagtgagctggaaaagctggcgctctatgcc
ggtgccgccccgggatcctcagcggcgacacccacagcccgcccaatcaacgtcgccgcg
gtgcaggccctgatcggcagccatgccaccaccagcctggccgtgggcgacgccctgctg
gcggggcgtcccgccgacgccatcgccctggtggacaacctgctggaggtgaacgaaccc
gctctgcggatcgtggcggcactgaccagtcagatccggggctggctgtgggtgagcctg
ctggacaaaacgggcgagaccgacgtggcgaccatcgccaaggccgccggcatcggcaac
cccaagcggatctacgtgatgcgcaaacagctccgcggccgcggcccggggccgctgctg
aagctgctcagccagctgctggaggtggaggccgccctgaagcggggcgcaacgccgggc
gatgccttccgcgacggcttcctgctcgccgggggcatcgcccttgaccatgcgggccga
taa
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