Synechococcus sp. CBW1002: H8F24_08880
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Entry
H8F24_08880 CDS
T10440
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
H8F24_08880 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_08880 (xseA)
Enzymes [BR:
synz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
H8F24_08880 (xseA)
DNA repair and recombination proteins [BR:
synz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
H8F24_08880 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
QPN61623
LinkDB
All DBs
Position
complement(1842434..1843612)
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AA seq
392 aa
AA seq
DB search
MEPRSQNAYATSAGLPSFGVAELNRAIGTLLERGFAPRFLLEATVSRPQLKKGHIWLTLT
DGDATISGVIWSSLRQKLSYLPAEGDGVTIIGRLNFWDARASLCVQVLDIRPGRQAALRQ
FERVRELLAPEGWFDPERKRPLPEHPGCIALLTSVPSSALADMLRTARERWPATRILVVP
IPVQGPVEGEICTALEAVSRQAERLGVEALVLARGGGNREDLAVFDGERLARCLGSAAIP
VVCGLGHEDDTTIADLVADYRAATPTAALVALLPDQQGALLDLRQQRLHLQRSLRWRLDL
ETERLAQQRQRLEALHPQGLLVQSRQRLQEQRQLLQALSPQHILERGFSLVRGQDGHLLR
TWKEVNAGDAITVQLREGGLEAVVSRSAATSI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
ctggagccccgatcccagaacgcctacgccacatccgctggcctgccttcatttggcgtg
gccgagctcaatcgggccatcggaaccctgctggaacgggggtttgcgccgcgctttctg
ctggaggcgaccgtgagccgtccgcagctcaagaagggacacatctggctgaccctcacc
gatggcgacgccaccatctcaggggtgatctggtcttccctgcgccagaagctctcgtac
ctccccgccgaaggcgacggtgtcaccatcatcggccgtctcaatttctgggacgcccga
gccagcctctgcgtccaggtgctggacattcgcccagggcgccaggctgccttgcgccag
ttcgagcgggtgcgggaactgttggcaccggaaggctggttcgacccagagcgcaagcgc
cctctgcccgaacatcccgggtgcatcgccctgctcaccagcgtgcccagctccgccctg
gcggacatgctgcgcactgcccgcgaacgatggccggccacacggattctggtggtgccg
atccccgtgcagggtcccgtggaaggggaaatctgcacggcgctggaggccgtaagccgg
caggccgaacgactcggtgtcgaggcgttggtgctggcccgagggggagggaatcgagag
gatctggcggtgttcgacggcgaacggctggcccgttgcctgggcagtgccgcaatcccg
gtggtctgcggtctgggccatgaagacgacaccaccattgctgatctggtggcggactat
cgggccgccacgcccacggccgcactggtggccctgctgcctgaccagcagggggcactt
ctggatctgcgccagcaacgtctccatctgcagcgatccttgcgctggcgcctcgatctg
gaaacagaacggctggcgcagcaacgccagaggctcgaggctcttcacccccaagggctg
ctggttcagagccgccagcgtctgcaggagcaacgtcagttgcttcaggccctctcgccg
cagcacatcctggagcgtggcttctcgctggtgcgggggcaggatggccatctgctgcgc
acctggaaggaggtgaacgccggtgacgcgatcactgtgcagctccgtgagggggggctg
gaagccgtggtgagccgcagtgccgcaacctcgatctga
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