Synechococcus sp. CBW1002: H8F24_09895
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Entry
H8F24_09895 CDS
T10440
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H8F24_09895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_09895
Enzymes [BR:
synz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
H8F24_09895
DNA repair and recombination proteins [BR:
synz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H8F24_09895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
RsgA_GTPase
nSTAND3
AAA_29
NTPase_1
MeaB
AAA_22
NACHT
PIF1
AAA_16
HHH_2
T2SSE
NPHP3_N
ABC_tran
AAA_28
AAA
UvrD-helicase
cobW
AAA_23
MobB
TsaE
Herpes_Helicase
CbiA
ATP_bind_1
MMR_HSR1
AAA_3
DEAD
Mg_chelatase
SLFN-g3_helicase
AAA_14
RuvB_N
TrwB_AAD_bind
NB-ARC
AAA_24
ATPase_2
SMC_N
HHH
DUF815
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
QPN61639
UniProt:
A0A7T1HTV8
LinkDB
All DBs
Position
complement(2049735..2052020)
Genome browser
AA seq
761 aa
AA seq
DB search
MADTAAEPTEVLAGSIERVTFHNPSNGFCVLRIKARGHRELVTVVGHAAEISAGEWVTVS
GTWVNDREHGQQFKAAFLRSSPPTTAEGIEKYLGSGMIRGIGPIYASKLVAVFGAEVFEV
IEQAPERLREVPGIGKVRAGRIAQAWADQKVVREIMVFLHSHGVGTARAVRIFKTYGNDA
VQVMAENPYRLARDIRGIGFRTADAIAARLGIEPTATIRLRAGINYALLEASGDGHCGLP
TAELLKLAGELLAVDRPDETGSSNREPLEPEQIQSALDLELAKGAVVADSLADEPAIFLA
HLHKAERQIAESLQELAQGAPPWGVIDSAKAIGWVEQRLGLQLAASQQEAVEQALASKVL
VITGGPGVGKTTLINAILQILAAKKLRIQLCAPTGRAAKRMAEATGLEAKTIHRLLEFDP
ASYGFRRGAELPLECDLLVVDETSMVDVPLMASLLAAIPPEAALLLVGDVDQLPSVGPGQ
VLADAINSGALPVTRLTEVFRQAASSRIITTAHAINGGTIPDLRAPAEGVSSDFYFLPAE
TPEQAVALILKVVGERIPARFGLDPIAQVQVLCPMARGGCGSRSLNIELQKLLNPDPPEH
VERFGWRFAPGDKVMQIANDYEKEVFNGDVGTIDAIDSDNSELCVLFPTSEAGAAGSRAV
IYGWGELDTLVPAYACTIHKSQGSEYPAVVIPLLTQHYAMLQRNLVYTGLTRGKQLVVLV
GQKKALAMAVKNHLGRKRYTKLAEWLTPERLSADMGHNHGS
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaccgcagccgagcccaccgaggtgctggccggctcgatcgagcgtgtcacc
ttccacaaccccagcaacggcttctgcgtgctgcgcatcaaggcgcgcggtcaccgcgag
ctggtgacggtggtgggccatgccgccgagatcagtgctggcgagtgggtcacggtgagt
ggcacctgggtgaatgaccgggagcacggccagcagttcaaggccgccttcctgcgctcc
tcaccgcccaccaccgccgaggggatcgagaagtacctgggctccgggatgatccgcggc
atcggcccgatctacgccagcaagctcgtggcggtcttcggggcggaggtgttcgaggtg
atcgaacaggcccccgagcggctgcgggaggtgccgggcatcggcaaggtgcgcgccggc
cggattgctcaggcctgggctgatcagaaggtggtgcgcgaaatcatggtcttcctgcac
agccatggcgtcggcaccgcccgggcggtgcggatcttcaagacgtacgggaacgacgcc
gtgcaggtgatggcggagaacccctatcgcctggcgcgcgacatccgcggcatcggcttt
cgcaccgccgatgccatcgccgcccgcctcggcatcgaacccaccgccacgatccggctg
cgggcggggatcaactacgccctgctggaggccagcggtgatggccactgcggcctgccc
accgccgagctgctcaagctggcgggtgagctgctggcggtggaccgccccgatgaaacc
ggctccagcaatcgcgagccgctggagccggaacagatccaatcagccctggatctcgag
ctcgcaaaaggtgccgtggtggcggacagcctggcggacgagccggcgatcttcctggcc
cacctgcacaaggccgagcgccagatcgccgaatcgcttcaggagctggcgcagggggct
ccgccctggggcgtgatcgactcggccaaggcaatcggctgggtggagcagcggcttggc
ctgcagctggccgccagccagcaggaagcggtggagcaggccctggccagcaaggtgttg
gtgattaccggcgggccaggggtgggcaagaccaccctgatcaacgccatcctgcagatc
ctggcggccaagaagctgcgcatccagctctgcgcccccaccggccgcgccgccaaacgc
atggctgaggccaccggcctggaggcgaaaacgatccatcggttgctggagttcgatccg
gccagctacggcttccggcgtggcgccgagttgccgctggagtgcgacctgctggtggtg
gacgagacatcgatggtggatgtaccgctgatggcctcgctgctggcggcgatcccgccg
gaggcggcgctgctgctggtgggcgatgtggaccagctgccgtcggtgggtccagggcag
gtgctggccgatgcgatcaacagcggtgcgctgccggtgacgcggctcaccgaggtgttt
cgccaggcggcatccagccggatcatcaccactgcccacgccatcaacggcggcaccatc
cccgatctgcgggccccggccgagggcgtaagcagcgacttctacttcctgccggccgag
acgcctgagcaggcggtggccctgatcttgaaagtggtgggcgagcgcatcccggctcgc
tttggcctcgatccgatcgcccaggtgcaggtgctctgcccgatggcgcgcggcggctgc
ggctcgcgctcgctgaacatcgagctgcagaagctgctcaacccagatccgcccgagcac
gtggagcgctttggctggcggttcgcgccgggcgacaaggtgatgcagatcgccaacgac
tacgagaaggaggtgttcaacggcgatgtgggcaccatcgatgcgatcgactcagacaac
agcgaattgtgcgtgctgttcccaaccagcgaggccggcgccgccggcagccgggccgtg
atctatggctggggagagctcgacaccctggtgccggcctacgcctgcacgatccacaag
agccaaggcagcgagtacccagcggtggtgattccgctgctcacccagcactacgcgatg
ctgcagcggaaccttgtgtacacggggctcacccgcggcaagcagctggtggtgctggtg
ggccagaagaaggccctggccatggccgtgaagaaccacctggggcggaagcgctacacc
aagctggcggagtggctcactccggagcggctttcagcggacatgggtcacaaccacggc
agttga
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