Synechococcus sp. CBW1002: H8F24_10280
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Entry
H8F24_10280 CDS
T10440
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
synz Synechococcus sp. CBW1002
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synz03032
]
H8F24_10280 (topA)
03400 DNA repair and recombination proteins [BR:
synz03400
]
H8F24_10280 (topA)
Enzymes [BR:
synz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H8F24_10280 (topA)
DNA replication proteins [BR:
synz03032
]
Prokaryotic type
DNA Topoisomerases
H8F24_10280 (topA)
DNA repair and recombination proteins [BR:
synz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
H8F24_10280 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QPN58599
UniProt:
A0A7T1HN52
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All DBs
Position
2122024..2124807
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AA seq
927 aa
AA seq
DB search
MAHTLVIVESPTKARTIRGFLPKDFRVEASMGHVRDLPNNASEIPAAHKGEKWANLGVNT
ANAFEPLYVVPKDKKKVVKELKEALKGADQLLLATDEDREGESISWHLLQLLGPKVPVKR
MVFHEITKEAIGRALDQTRELDMELVHAQETRRILDRLVGYTLSPLLWKKVAWGLSAGRV
QSVAVRLLVQRERARRAFRSGSYWDLKAALEQAGSGFEAKLTHLRGERIAGGSDFDETTG
AIKAGSTVKLLAEDEARQLQDAVQAATWKVKTVEEKPTVRRPVPPFTTSTLQQEANRKLR
LSARETMRAAQGLYERGFITYMRTDSVHLSDQAITAARSCVSEKYGKDYLSPAPRQFSTK
ARNAQEAHEAIRPAGERFRTPSDTGLDGRDLALYELIWKRTVASQMADARLTMLSVELEV
AAGGSLGTANFRAGGKRIDFAGFFRAYVEGSDDPDAALEGQEVLLPALAVGDSPSCKAVE
ALGHQTQPPARYSEAALVKMLEKEGIGRPSTYASIIGTIVDRGYATQQGNALIPSFTAFA
VTGLLEEHFPDLVDTSFTARMENTLDEISHGKVSWLPYLEAFYKGETGLETQVQQREGDI
DPGVSRTVELEGLPCVVRIGRFGAYLETKRVSEDGSEELLKATLPQEITPGDLDAEKAEL
ILKQKAEGPESLGEDPETGEAVYLLFGQYGPYVQKGQVSDENPKPKRASLPKGVKPEELS
LADALGLLRLPRLLGEHPDGGKVQAGLGRFGPYVVHDKGKGEKDYRSLKAEDDVLTVGLE
RALELLAMPKRGRGGRTALKDLGTPEGAEEAIQVFDGPYGLYVKQGKVNASLPEGITAET
ITLEQAVELLGAKAASGKGKGRKTASSKATAAKTGAGKTGTASKTGTPKNAASGTSAAKP
AAKKPPATTKTGRLRASAVRVIKAAGS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
gtggcccacaccctggtcatcgtcgagagccccaccaaggcccgcacgatccgtggcttc
ctgcccaaggacttccgggtggaggcctcgatgggtcacgtgcgtgacctgcccaacaac
gccagcgagatcccggcggcccacaagggcgagaagtgggccaatctgggggtcaacacg
gccaatgccttcgaaccgctctacgtggtgccgaaggacaagaaaaaggtggtgaaggag
ctcaaggaggccctcaagggcgccgatcagttgctgctggccaccgacgaagaccgggaa
ggcgagagcatcagctggcatctgctgcagctgctcggccccaaggtgccggtcaagagg
atggtgttccacgagatcaccaaggaggcgatcggccgggccctggaccagacccgcgag
ctcgacatggagctggtgcacgcccaggaaacgcggcgcatcctggatcggctggtcggt
tacaccctctcccccctcctgtggaagaaggtggcctggggcctgtcggccggacgcgtt
cagtcggttgcggtgcgcctcctggtgcaacgcgagcgagcgcggcgggccttccgcagt
ggcagctactgggacctcaaggccgctctggaacaggccggcagtggcttcgaggccaaa
ctcacccatctgcgcggcgaaaggatcgccggcggcagtgacttcgacgaaaccaccggc
gcgatcaaggctggcagcaccgtgaagctgctggccgaggacgaagcccgccagctccag
gacgccgtgcaggccgccacctggaaggtgaagacggtggaggagaaacccacggtgcgc
agacccgtgccccccttcaccaccagcaccctgcagcaggaagcgaaccgcaagctgcgg
ttgtcggcccgcgagaccatgcgcgccgcccagggcctctacgaacggggcttcatcacc
tacatgcgcaccgactcggtgcacctcagtgatcaggccatcaccgccgcccgcagctgc
gtcagcgagaaatatggcaaggactacctcagcccggcaccgcggcagttcagcaccaag
gcccgcaacgcccaggaggcccacgaggcgatccggcctgccggcgaacgattccgcacc
cccagcgacaccggcctggacggccgcgatctggctctctacgagctgatctggaaacgc
acggtggccagccagatggccgatgcccgcctgacgatgctgagcgtggaactggaagtg
gctgccggcggcagcctcggcaccgccaacttccgcgccggtggcaagcggatcgacttc
gccggattcttccgggcctacgtggagggatccgacgatcccgatgccgccctggagggc
caggaagtgctgctacccgccctggcggtgggggacagcccgtcctgcaaggccgtggag
gcactcggccaccagacccagccccccgcccgctacagcgaagcggccctggtgaagatg
cttgagaaggagggcatcggtcgaccctccacctacgcctcgatcatcggcacgatcgtg
gaccggggctatgccactcagcagggcaacgccctgattcccagtttcaccgccttcgcc
gtgaccggactcctggaggagcactttccggatctggtggacacgagtttcaccgcccgc
atggagaacaccctcgatgagatctcccacggcaaggtgtcctggctgccgtatctcgag
gctttctacaagggcgaaaccggcctcgaaacccaggtgcagcagagggagggggacatc
gaccccggcgtctcgcgcacggtggagctggagggcctgccctgcgtggtgaggatcggc
cgcttcggcgcctacctcgaaaccaagcgcgtcagcgaagacggcagcgaagagctgctc
aaggcaaccctgccccaggagatcacccccggtgatctcgatgcggaaaaggccgagctg
atcctcaagcagaaggctgaggggcccgaatccctcggggaggatcctgaaaccggagaa
gcggtctatctgctgttcggccagtacggcccctatgtgcagaagggccaggtcagcgac
gagaaccccaagcccaaacgggcctccctgcccaagggtgtcaagcctgaggagctcagc
ctcgccgatgccctgggcctgctgcggttaccgcggctgctgggagagcatcccgatggc
ggcaaggtgcaggcgggtctgggacgcttcggtccgtacgtggtgcacgacaagggcaag
ggggaaaaggactaccgctccctcaaggccgaagacgatgtgctcaccgtgggtctggag
cgggccctggagctgctggccatgcccaagcgcggccgcggtggccgcacggcgctcaag
gatctgggcacgcccgagggcgccgaggaggccatccaggtgttcgatgggccctatggc
ctctatgtgaagcagggcaaggtgaatgcctccctgccggaaggcatcaccgccgagacg
atcaccctggagcaggccgtggagctgctgggggccaaggcggccagcggcaagggcaag
ggccgcaagaccgcttcctcgaaagcaactgcggccaagaccggtgccggcaagacaggc
accgcttccaaaaccggaacccccaagaatgcagccagcggcacctccgcagccaaacca
gcggcgaaaaagccccccgccaccaccaagaccggtcgcctgcgggccagtgccgtgcga
gtgatcaaggcggccggcagttga
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