Synechococcus sp. CBW1002: H8F24_10375
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Entry
H8F24_10375 CDS
T10440
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
synz Synechococcus sp. CBW1002
Pathway
synz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H8F24_10375 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synz03019
]
H8F24_10375 (groL)
03110 Chaperones and folding catalysts [BR:
synz03110
]
H8F24_10375 (groL)
03029 Mitochondrial biogenesis [BR:
synz03029
]
H8F24_10375 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
synz04147
]
H8F24_10375 (groL)
Enzymes [BR:
synz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
H8F24_10375 (groL)
Messenger RNA biogenesis [BR:
synz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
H8F24_10375 (groL)
Chaperones and folding catalysts [BR:
synz03110
]
Heat shock proteins
HSP60 / Chaperonin
H8F24_10375 (groL)
Mitochondrial biogenesis [BR:
synz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
H8F24_10375 (groL)
Exosome [BR:
synz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
H8F24_10375 (groL)
Exosomal proteins of other body fluids (saliva and urine)
H8F24_10375 (groL)
Exosomal proteins of breast cancer cells
H8F24_10375 (groL)
Exosomal proteins of colorectal cancer cells
H8F24_10375 (groL)
Exosomal proteins of bladder cancer cells
H8F24_10375 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF1382
Motif
Other DBs
NCBI-ProteinID:
QPN58611
LinkDB
All DBs
Position
complement(2142006..2143700)
Genome browser
AA seq
564 aa
AA seq
DB search
MAKLIQFADQSRESLERGVNALADAVRVTIGPKGRNVVLEKKFGAPDIVNDGVTIARDIE
LEDPFENIGAKLIQQVAAKTKDKAGDGTTTATVLAQSMVREGMKNVAAGASPVQLRRGME
QAVALVVSGIAARAQSVAGDAIRQVATVSSGNDDEVGGMIAKAMDTVSADGVITVEESKS
LATELEITEGMAFDRGYSSPYFVTDQERLECVYENALLLITDRKVSSVADLVPVLEAVAR
SGRPLVILAEEVDGEALATLVVNKNRGVLQVAAVRAPGFGDRRKAMLEDIAILTGATVVS
EDRAMSLEAVTLADLGTARRITITKDSTTLVATDDHRQAVVDRVAAIKRELDATDSEYDC
EKLNERIAKLAGGVAVIKVGAPTETELRNRKLRIEDALNATRAAIEEGIIPGGGFTLLQL
ASELDGLLASSSGDARTGVAIVQHALGEPARQIAVNAGADGSVVTSECLSRGQGYNAATG
SYEDLLAAGIVDAAKVVRLALQDAVSIAALLITTEAVIADKPEPAAASPGGDMGGMGGMG
GMGMPGMGGMGMPGMGGMGMPGMM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattgatccagttcgccgatcaatcgcgcgaatctctggaacggggggtcaat
gccctggccgacgccgtgagggtcacgatcggtccgaagggccgcaacgtcgtgctggag
aagaagttcggcgctccggacatcgtcaatgacggtgtcaccatcgcccgggacatcgaa
ctcgaggatcccttcgagaacatcggcgccaagctgattcagcaggtggccgccaagacc
aaggacaaggccggtgacggcaccaccacggccacggtgctggcccagtcgatggtgcgg
gaaggcatgaagaatgtggccgctggcgccagcccggtgcagctgcgccgcggcatggag
caggccgttgccctggtcgtgagcggcatcgccgcccgtgcccagtcggtggcgggagac
gccatccgccaggtggccaccgtgagctccggcaacgacgacgaagtgggcggcatgatc
gccaaagccatggacacggtgagcgccgacggggtgatcaccgtggaggagtcgaaatcc
ctggccaccgaactggagatcaccgaaggcatggccttcgatcggggctacagctccccc
tacttcgtgaccgaccaggagcggctggagtgcgtctatgagaatgccctcctgctgatc
accgaccgcaaggtgagcagcgtcgccgatctggtgccggtgctggaggccgtggcccgc
agtggccggcccctggtgatcctggccgaggaggtggacggtgaggccctggccaccctg
gtggtgaacaagaaccgcggcgtgctgcaggtggcggccgtgcgggctcccggcttcggc
gatcgccgcaaggccatgctggaagacatcgccatcctcaccggcgccaccgtggtgagc
gaggacagggccatgagcctcgaggcggtgaccctcgcggacctgggaacggcccgccgg
atcacgatcaccaaggacagcaccactcttgtggcgaccgatgatcaccgccaggcggtg
gtcgaccgggtggccgcgatcaagcgcgaactcgatgccaccgactccgagtacgactgt
gaaaagctcaacgagcggatcgccaaactcgccggcggcgtggcggtgatcaaggtggga
gcccccaccgaaaccgaactgcgcaaccgcaagctgcgcatcgaggatgccctcaatgcc
acccgtgcggcgatcgaggagggcatcattcccgggggcggcttcacccttcttcagctg
gcctcggagctcgatggcctgctggcgagcagcagcggcgatgctcgaaccggtgtggcg
atcgtgcagcacgccctgggtgagccggcgcgtcagattgcggtcaacgccggtgccgat
ggttcggtggtgacctccgagtgcctgagccggggtcagggctacaacgccgccacgggt
agttacgaggatcttctggccgctggcatcgtcgatgccgccaaggtggttcgtctcgcc
ctgcaggatgcggtgtcgatcgcagcgctgctgatcaccactgaagcggtgatcgccgac
aagcccgagcccgctgctgcctcccctggtggcgacatgggtggcatgggcggaatgggc
ggtatgggcatgcccggcatgggcggcatggggatgcccggcatgggcggcatggggatg
cccggcatgatgtga
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