Synechococcus sp. CBW1002: H8F24_12205
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Entry
H8F24_12205 CDS
T10440
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
synz Synechococcus sp. CBW1002
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synz03021
]
H8F24_12205
Transcription machinery [BR:
synz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H8F24_12205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QPN61724
LinkDB
All DBs
Position
complement(2489551..2490180)
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AA seq
209 aa
AA seq
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MASPASSSRRQQQSTPLSRSALRARNALVLEHLPLADALASAAARRLFPLVEREDLIQVA
REALVRSAPRCRAGEPPAPYLRRCIQGALQHHLCDRVRLVRVPRRLHEQGQCPLGHLSLD
ATADSEHCLLDQLASPEPEPASSEAMNGLGLEQLVEQLPAAQATALRLTVLEGLSLRAAA
AQLQISPMAVQRAQKKALAALRQQLAGGG
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
gtggcttcccccgcttcctcctcccgtcgccagcagcagtccacgcctctcagccgttct
gccctgcgtgcccgcaatgccctggtgctggagcacctgcccctggctgatgccctcgct
tccgccgccgcccgccgcctcttcccgctggtggagcgggaggatctgatccaggtggcc
cgtgaggccctggttcgctccgctccccgctgcagagcgggcgagccgccagcgccctat
ctgcgccgctgcatccaaggggcgctgcagcaccacctgtgcgatcgggtgcggctggtg
cgcgtgccacgccggctgcatgagcagggccagtgcccactggggcacctcagcctcgat
gccacagccgatagcgagcactgcctgctcgatcagctggcctcccctgagcccgagccg
gcatccagcgaggccatgaatggcctggggctggagcagctggtcgagcagctgcccgca
gcccaggccacagccctgcggctcaccgtcctcgaggggctgtccttgcgggccgccgcg
gcgcagctgcagatcagcccgatggccgttcagcgggcccagaaaaaggccctcgccgcc
ctgcgccagcagctggcaggtgggggctga
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