Synechococcus sp. CBW1002: H8F24_13485
Help
Entry
H8F24_13485 CDS
T10440
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
synz Synechococcus sp. CBW1002
Pathway
synz02010
ABC transporters
synz03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
H8F24_13485
03070 Bacterial secretion system
H8F24_13485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synz02000
]
H8F24_13485
02044 Secretion system [BR:
synz02044
]
H8F24_13485
Transporters [BR:
synz02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
H8F24_13485
Secretion system [BR:
synz02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
H8F24_13485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
Peptidase_C39
AAA_16
SbcC_Walker_B
AAA_29
AAA_30
DUF6223
Motif
Other DBs
NCBI-ProteinID:
QPN59089
UniProt:
A0A7T1HP22
LinkDB
All DBs
Position
complement(2716816..2719764)
Genome browser
AA seq
982 aa
AA seq
DB search
MSTTTIDSSLLQRLQEDHQAFHYPTGRFLLRCDQLAPHVLLLRHGQVRLLAHDPLEGSFT
LERLGPGALLGWASLLRAEPCETVIAMEPCQVVAIPAARFLDLHRNSPDLQQLCHQPASA
ELAEALLRWWHNDHPHHLPNTPAQLLRLLPTATPASVRLATAQELDDPQQRGPERLWIWS
GHPEQRRLLSLDRSWAALDQLPPQPAEPAAREVTGFDPLLVESLPEAPAPGEPIDPATLG
LPVPPAPPPLGPLPRVKGRPATALACLRRLGQLQRFPVPLDSLRLALEDCEQRLGGVTLQ
HIGQLVESIGLEARPLACPPSHFHRLEAPAVLEREGHFALLEAAGPKGWSLTDPSEGLLT
LSLPELRRLWPEGVELMLVRQPTGAVVDARASRFDLAWFAEALRPYRGRLAVVLLTGFTQ
KLLELIFPLATLQIVDLVVGSGNSSLLAPIALVLGVTAVVLGVLGVLRELLLADLADRID
TNLGSQVVGHLFRLPLRFFDRRTVGDLASRLHDLQQVRQFLTDTAIGSVIDVVFIPILLA
ILFLLQPVLAWVVLAQVPLLILLNQLGGRLSERQLTRRNTAWSRSMGWLVEVLSAIRTVK
SQNFASEARWEWLQRQRTYAAADYRLSRNRSLVKESSSTVLNIGKMTVFLVAAVLALRGE
ASVGAIFAVYLLSSGVTGPLVNLSRLWDQYRDARAAMAAVADVIGQPPEEAEGLQEMPLP
QIQGTIRFRKVSFGYNLDNRRQLDRLDLAIEAGSFVGLVGLSGSGKSTVVQLIDALYRPS
EGRIFIDDIDIAQVQLASLRRQIGFVPQDSILFDGTVLDNLRLNQPDAPLEAVVAAAQVA
CAHEFISDLPGGYLSRVGERGGGLSGGQKQRIAIARMVLQNPSLVILDEATSALDADTEK
RVVQQLRRHFRGRTLLFVTHRLGNLRQADRILVMESGRVVEDGSWSELVAALGSFAALAK
QQHELAGAAIPAAAEEPGSLQE
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
ttgagcaccaccacgatcgactcctctctcctgcaacggctgcaggaggatcaccaagcc
ttccactaccccaccggccgcttcctgctgcgctgcgatcagctggctccccacgtgctg
ctcctgcgtcacgggcaggtgcggctgctggcccacgatccccttgaaggatcgttcacc
ctggagcgcctcgggcccggtgccctgctcggctgggccagcttgctgcgggccgaaccc
tgcgaaaccgtgatcgccatggagccctgccaggtggtggcgattccggcggcgcgcttt
ctggatctgcaccgcaactcgccagacctgcagcagctctgccaccagcccgccagcgcc
gaactggccgaagccctgctgcgctggtggcacaacgaccacccccaccacctgcccaac
acgcccgcccagctgctgcgcctgctgcctaccgccacccccgcctcggtccggctggcc
acggcgcaggaactggacgatccccagcaacgcggacccgaacggctctggatctggagt
ggtcatcccgagcagcggcgattgctcagcctcgatcgcagctgggcggcgttggatcag
ctgccgccgcagcctgccgaaccagcagcacgggaggtcacaggcttcgatccactgctg
gtcgagtccctgcccgaagctccagctcccggcgaaccgatcgaccccgcaaccctcggg
cttcccgtaccgccggcgccaccgccgcttgggcccctgccccgcgtcaagggtcgtccc
gccaccgccctggcctgcctgcggcggctcggccagctgcagcggttcccggtgccgctc
gacagcctccgcctcgccctcgaagactgcgagcagcgcctcggtggggtgaccctgcag
cacatcggccagctggtggaatccatcggcctggaggcccgccccctggcctgccccccc
agccacttccaccggctcgaggccccggcggtgctcgagcgtgagggtcatttcgccctg
ctggaagccgccggccccaaaggatggagcctcaccgatcccagcgaaggcctgctgacg
ctctccctgcccgagctgcgccgcctctggcccgagggtgtggagctgatgctggtgcgc
cagcccaccggcgccgtggtggatgcccgcgccagccgcttcgatctggcctggttcgcc
gaggccctgcggccttaccgcggccgcctcgcggtggtgctgctcaccggcttcacccag
aagctgctggaactgatctttccgctcgccaccctccagatcgtcgatctggtggtgggt
agcggcaacagctccctgctcgccccgatcgccctggtgctgggcgtcaccgccgtggtg
ctgggggtgctgggggtgctgcgcgagttgctgctggccgatctggccgaccggatcgac
accaacctcggcagccaggtggtgggccatctcttccgcctgccgctgcgcttcttcgat
cggcgcaccgtgggcgatctcgccagccgcctgcacgatctccagcaggtgcgtcagttc
ctcaccgataccgccatcggctcggtgatcgatgtggtgttcatccccatcctgctggcc
atcctgtttctgctgcaaccggtgctggcctgggtggtgctcgcccaggtgcccctgctg
atcctgctcaaccagctcggcggccggctcagcgaacggcagctcacccgccgcaacacc
gcctggagccgttcgatgggctggctggtggaggtgctcagcgccatccgcaccgtcaag
agccagaacttcgcctccgaagcccgctgggaatggctgcagcggcagcgcacctacgcc
gccgccgattaccgcctctcccgcaaccgctccctggtgaaggaaagctcctccaccgtg
ctcaacatcggcaagatgaccgtcttcctggtggcggcggtgctagccctgcggggtgag
gcgtcggtgggggcgatcttcgcggtgtatctgctctcctccggcgtgaccggccccctg
gtcaacctctcgcgcctctgggaccaataccgcgatgccagggccgccatggccgccgtg
gccgatgtgatcggccagccgcccgaagaagccgaaggcctgcaggagatgcccctgccc
cagatccagggcaccatccgcttccgcaaggtgagcttcggctataacctcgacaaccgc
cgccagctcgatcggctcgacctggcgatcgaggccggcagcttcgtgggcctggtgggg
ctgagcggcagcggcaagagcacggtggtgcagctcatcgacgccctctaccgacccagc
gaaggccgcatcttcatcgacgacatcgacatcgcccaggtgcagctcgccagcctgcgc
cgccagatcggcttcgtgccgcaggattcgatcctgttcgatggcaccgtgctcgacaac
ctgcgcctcaaccagcccgatgcaccgctcgaggcggtggtggccgccgcccaggtcgcc
tgcgcccatgagttcatcagcgacctgcccggtggctacctcagccgcgtgggggagcgg
ggcggcggcctctccggcggccagaagcagcggatcgccattgcccgcatggtgctgcag
aaccccagcctggtgatcctcgatgaggccaccagcgccctcgatgccgacaccgaaaag
cgggtggtgcagcagctgcggcgccacttccgcggacgcaccctgctgttcgtgacccac
cggctcggcaacctgcgccaggccgatcgaatcctggtgatggagagcggccgcgtcgtc
gaagacggcagctggagcgagctggtcgccgccctcggcagcttcgccgccctggcgaaa
caacagcatgaactggccggtgccgccatccctgccgccgccgaagagcccggaagcctc
caggaatga
DBGET
integrated database retrieval system
