Synechococcus sp. CBW1002: H8F24_16145
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Entry
H8F24_16145 CDS
T10440
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
synz Synechococcus sp. CBW1002
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synz03016
]
H8F24_16145
Enzymes [BR:
synz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H8F24_16145
Transfer RNA biogenesis [BR:
synz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
H8F24_16145
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GFIT
Motif
Pfam:
RNB
HTH_RNase_II
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QPN61816
UniProt:
A0A7T1MF77
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Position
complement(3259208..3261262)
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AA seq
684 aa
AA seq
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MPLASQTLQPGDLVGLSTDKGPQLALVRGLQSGKAKVLAGFLARPQQLPLRQITLLIPLP
SGADIPAGLGASPWNLSAEVVAEALPSRRQLGEAWHLLVEDGQPQPLSDFASLLGDGANP
ALLAACWLWLEGDQLLFRWRHGVVEPRPVDELRRLRRDRRRERLVLERRRRWHEALRRRQ
PLDPTTLDPEHRRDLELLMLWAGGDSTDPLPLELRQALQVAHCPAETGAIRHLMVDLGLW
QPHHLPSLARSHWQHGFSDELLTEAEELVAQADQPQPGDEQRRDLTGLRMVTIDDADTRD
IDDGLSLETLPGGVQRLWIHVADPGRLVPAGSALDLEARRRASSLYLAGGTLPMFPECLS
TGPFSLVQGRRCAAWSLWVELDATGAVADFGLQRSWVQPTYRLSYADADELIELAPPQEA
DLLCLHQLLLRRRGWRQQHGALMMDQPEGRIRAAGDEPVLEIVEPGPSRLLVAEAMILAG
AVVAEFGRREGLALPYRSQLPTELPSPAELEALPPGPVRHAAIKRCLSRSHTGTQPALHF
SLALEGYAQATSPIRRYGDLLVQRQLQAALTDQAPLPEEDVAALLSELEDPVKQGIQISR
EDHRHWQQVWFAAHQRDQWPGVFLRWLRPQERLALVHVEDLAMDLVAECPEGSDPGDALL
LRVLEVDPLRDQLRLQGRASVGQA
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atccctctggcttcccagaccctccaacccggcgatctggtcggactgagcacggacaag
gggccccagctggccctggttcggggtctgcagtctggcaaagccaaggtcctggccggt
tttctggcccgaccgcagcagttgccgctgcgtcagatcaccctgctcatccccctgcct
tcaggagctgatattcctgcgggtctgggggcttcgccatggaacctctccgcagaggtt
gtggccgaggctttgccgtcccgacggcagcttggcgaggcctggcaccttctggtggaa
gacgggcagccccaaccactctcggatttcgcttccctgctcggcgatggggccaacccc
gccctgctcgccgcctgctggctctggctggaaggcgaccagctgctgttccgctggcga
cacggggttgtggaaccccggccggtggatgagctgcggcgcctgcggcgcgaccggcgc
cgtgaacgcctggtgctggagcgccgccgccgctggcatgaggccctgcggcggcgccag
cctctggatcccacaactctcgatcccgagcatcgccgcgatctggagctgctgatgctc
tgggccgggggcgacagcaccgaccccctgccgctggagctgcgccaggcgctgcaggtg
gcccactgccctgccgagaccggagcgatccgccacctgatggtggacctgggtctctgg
cagccgcaccacctgccttccctggctcgcagccattggcagcacggcttctccgacgaa
ctcctgacggaggccgaagagcttgtcgcccaggcggatcagccccagcccggcgatgag
cagcggcgggatctcaccgggctccggatggtgacgatcgacgatgccgacacccgcgac
attgacgacggcctctcgctcgagaccttgccgggtggtgtgcagcgcctctggattcat
gtggccgatccgggtcgactggtgccggcgggttcagcgctcgacctcgaagcccgacgc
cgggccagcagcctctacctggcggggggaaccctgccgatgtttccggagtgcctctcc
accggtcccttcagcctggtgcagggccgtcgctgtgcggcctggagtctctgggtggag
ctcgatgccaccggggccgtggccgacttcggcctgcagcgcagctgggttcaacccacc
tatcgcctctcctacgccgacgccgacgagctgatcgaactggcgccgccgcaggaggct
gatctgctttgcctgcaccagctgctgctgcgccggcgtggctggcgccagcagcatggc
gccctgatgatggatcaacccgaaggccgcatccgcgccgccggcgacgagccggtgctg
gagatcgtcgagccgggtccatcgcggctgctggtggccgaagcgatgatcctggcgggg
gccgtggtggccgagttcggtcgccgggagggtctggcactcccctaccgcagccagctt
ccgactgagctgccgtcgccggccgagcttgaggcgttgccaccggggccggtgcgccac
gccgccatcaagcgctgcctcagtcgcagtcacaccggtacccaaccggctctccacttc
agcctcgctctggagggatacgcgcaggccacctcaccgatccgacgctacggcgatctg
ctcgtgcagcgccagctgcaggccgccctgacggatcaggcgccattgccggaggaggac
gtggcggcgttgctgagcgagctggaggacccggtcaagcaggggattcagatcagccgt
gaggatcaccgccactggcagcaggtgtggttcgcggcccatcagcgtgaccagtggccc
ggggtgtttctgcgctggctccgtccgcaggagcggctggctctggtgcatgtcgaagac
ctggccatggatctggtggcggaatgccccgaaggcagcgatccgggcgatgcgctgctg
cttcgggttctcgaggtggatcccctgcgcgatcagctgcgtctgcaggggcgggcctca
gtcggtcaggcgtga
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