Synechococcus sp. CBW1002: H8F24_18315
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Entry
H8F24_18315 CDS
T10440
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
synz Synechococcus sp. CBW1002
Brite
KEGG Orthology (KO) [BR:
synz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
H8F24_18315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synz03021
]
H8F24_18315
Transcription machinery [BR:
synz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H8F24_18315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r3
HVO_2718
Sigma70_r4_2
SpoVR_C
Motif
Other DBs
NCBI-ProteinID:
QPN59859
LinkDB
All DBs
Position
3723764..3724624
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AA seq
286 aa
AA seq
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MPLDSGSDGLTEYLYLLRRVPLLTASEELHLAAIVQQWLKDPQPTKALRCSAERARNRMV
SANLRLVVMIARRYSSRLDGLHLEMLDLLQAGNLGLIEAVERFDPKRGYKFSTYAFWWIR
KAIGNCLRESGSPIRIPVPMITLVSRAHRLQARSDRSLTTRELAAALDVEEERLEASLRA
VRHSRMTSLHQPIAGATDDLCLIDAIADERVPVLEEDYRWLREQVEALDHRERRLLSLRY
AEPDGRSLSSTAEMMGLTKGVVQNLERQTFRKLRRCLAPVLDPCTA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ttgcctcttgattcagggtccgatggactcacggaatatttgtatttattgcgacgagtt
ccgctgctcacggcatcagaggaacttcacctggccgccatcgtgcagcaatggctgaag
gatccccagcccacgaaagctctgcgttgcagtgcggagagagccagaaaccggatggtg
tccgccaatctcaggctggtagtgatgattgcacgccgatacagcagtcgtctcgatggc
cttcatctggaaatgcttgatttgctgcaggccggcaacctgggcttgattgaggccgtg
gagcgatttgatccgaaacgaggctataagttttctacctacgccttctggtggattcgc
aaagcgatcggcaattgcttgagggaatcgggctctcccatccgcatcccggtcccgatg
atcaccctggtcagccgcgcccataggctgcaggcccgctccgatcggagcctcacaacc
cgcgagctggctgctgcgcttgatgtggaggaggagcggctggaggcctcgcttcgtgcc
gttcggcacagccgcatgacctccctgcatcagccgattgccggcgcaacagacgatctc
tgcctcatcgatgcgattgccgatgagcgtgttccggtgctggaagaggattaccggtgg
ttgcgggaacaggtggaggcactggatcaccgggagcgccgtcttctgagcttgcgatat
gccgaaccggatggtcgctccctgagctccaccgcagagatgatggggctgaccaaaggt
gtggttcagaatctggagcggcagacctttcggaagctgcgccgttgtctggcgccggtt
cttgatccctgcacggcctga
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