Synechocystis sp. IPPAS B-1465: C7I86_02365
Help
Entry
C7I86_02365 CDS
T05368
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
syo
Synechocystis sp. IPPAS B-1465
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syo03400
]
C7I86_02365
DNA repair and recombination proteins [BR:
syo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C7I86_02365
Archaeal homologous recombinant proteins
C7I86_02365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
SbcC_Walker_B
AAA_29
ABC_tran
Rad50_zn_hook
AAA_21
cobW
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AVP88625
LinkDB
All DBs
Position
498076..501096
Genome browser
AA seq
1006 aa
AA seq
DB search
MVPQQLILKNFLSYQDVSLNFRGLHTACICGSNGAGKSSLLEAITWAIWGKCRAESEDDV
LHNGTDQVRVDFEFISNNQTYRIIRSRQRGRSSVTEFQIKSGDHFRTLSAKGLRATQEKI
TNTLKLDYETFVNSAYLRQGRADEFMLRKPSERKQILADLLKLDQYEMLATRAKDISKEA
KGKINILDERLQILEQDLNQRPDVVANQAKLVAEITEVQAQQQQTQWQLQQLQTSQNQRQ
QWQKQAGWQQRQCQELTTEIARLENQNEEINQQCQKLKLLLEQEAVIQVNFQRYQTLQSQ
ETELAKAFQQYQNLQQQRQDLEQQLQRQENELARQTEQQLLRLEHLDKQLAELQPILAQQ
QDIEADLDKLKIAKQKLSQLDNLQHQVAPLLQRRSALQGDLARARAQCQAQLEQRQAIAK
QLQIAIAAIPEQRRAFQALDEEIFQLKNKQVYLKRVEEKGQERGHFKERLQENQRLFEKQ
LRELEQKLTLLGIPGATCPLCEQGLDGHYHQQVIEKTEHQCQELRNQIWILKEQITLADQ
ELAILRNEYKEIADGLTNLEQLLQHYGQMEAELEKSGENHEQLVELNEQIADLELSLTEG
NFAESLQLELAALERELTNLAYDEQTHALARSTVDQLRKGEIRQAKLKEAQSKYRQLTGD
RPGLEQKLLALRSQLQSLGTSSPLRQQWQQVSTAISELNYNNETHQQLLGELRRQQPWQL
KHQELEQARQQLPILIQRGQEYQDLIGDRQRALEERQGELAQLEEQIRQYADHGEQIKLL
EQELAQRRQQLDNLLAKKGGLEQLLIQIDTLQGEYEETKQQFDQAKKQFRIHQELGKAFG
KDGIQVMIIENILPQLEAETNYILARLTGNQHHIQFVTQKEGKSSTKNKPKMINTLDILI
ADAQGTRPYETYSGGEAFRINFSIRLALAKLLAQRSGTALQLLIIDEGFGTQDADGCDRL
VAAITAIASDFACILTVTHMPQFREAFQQRIEVNKTEFGSQLAIVS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggtgccccaacaattaattttaaaaaatttcctcagttatcaggatgtgagcctgaac
tttcggggcctgcatacggcctgtatctgtgggtctaacggtgcgggtaaatcgtctttg
ttggaagcaatcacttgggcaatttggggcaaatgtcgggctgaaagtgaggatgatgtg
ctccataacggcaccgaccaagtgagagtggattttgaatttattagtaataaccaaacc
tatcgaattattcgtagtcgccaacgggggcgcagtagtgtaacggaatttcagatcaaa
agcggtgatcatttccgcaccctttccgccaaaggactcagggccacccaagaaaaaatc
accaacaccttaaagttagattacgaaacttttgtcaattccgcctatcttcgccaggga
agagccgatgaatttatgctacgtaaacccagtgaacgtaagcaaattctggcagattta
ttaaaattggaccagtatgaaatgttggcaactagggccaaagatatttccaaagaagcc
aagggtaaaattaatattctcgatgaacgtttacaaatcttagagcaggatttaaatcaa
cggccggatgtggtagctaatcaagccaaactagttgcagaaatcacagaagtgcaagcc
caacaacaacagacacaatggcagttacaacagctacaaactagtcaaaatcaacgtcaa
caatggcaaaagcaagccggatggcaacagcgacagtgtcaggaattgactactgagatt
gccaggttagaaaaccaaaatgaagaaattaatcagcaatgtcaaaaactaaaattactc
ctagagcaagaagcagttattcaagttaattttcagcgctatcaaaccttacaaagccaa
gaaacagaattagctaaagcttttcagcaatatcaaaatttgcaacagcaacgacaggat
ttggagcaacagttgcagcgtcaagaaaatgaattagcgagacaaacagagcagcagctt
ctgcgtttggaacatctggataagcaattggccgagttacaacctattttggctcaacaa
caggacattgaagcggacttagataagttaaaaattgccaaacaaaaactaagccagctt
gataaccttcaacatcaagttgcgccccttttacaacgacgttctgccctacaaggggat
ttagctagggccagggcccagtgtcaggctcaactagaacaacgccaggcgatcgccaaa
caattacagatagccatcgctgctattcctgagcaaagaagggcttttcaggctttggat
gaggaaattttccaactaaaaaataaacaggtttatcttaaacgagtggaagaaaaaggc
caggaaaggggtcatttcaaagaacgactccaggaaaatcaacgattgtttgaaaaacag
ttacgggaattagaacaaaaactgaccttattgggcattcctggggcaacttgtccccta
tgtgaacagggtttagatggccactaccaccaacaagtgattgaaaaaactgagcatcaa
tgtcaagaactacgcaatcaaatttggattctgaaggaacaaattacccttgcagatcaa
gagctagctattctccgtaatgaatataaagaaattgccgatggcttaactaatttagaa
caattgttgcaacattatggacaaatggaagcagaattagaaaaaagtggagaaaaccat
gaacaattagtggagttaaatgagcaaattgctgacttagaattgagcttgaccgaagga
aactttgctgaatctctccaattagaattagcggctctagagcgagaattaactaactta
gcctacgacgaacaaacccatgctttggcccgctctacggtggatcaactaagaaaaggg
gaaattcgccaagctaagttgaaagaagcccaaagtaaatatcgacaattaacaggcgat
cgccctggtttggagcaaaaattactggcattgcgttcccaattgcaaagtttgggcacc
agttctcccctccgccaacaatggcaacaggtgagtacagctatatccgaactgaattac
aacaacgaaacccatcaacaattattgggagaattgcgacgtcaacaaccttggcagtta
aagcatcaggagctagaacaagcccggcaacaattaccaatcctaatacaacggggccag
gaataccaagatctaattggcgatcgccagcgcgccctagaggaaagacaaggagaattg
gcccagttagaagaacagattcgccagtatgcagaccatggggaacaaattaaattgttg
gagcaagaattagcacaaagaaggcaacaactggataatttgctggcaaaaaaaggtggt
ttggagcagttattaattcagattgatactttacagggagaatatgaagaaacaaaacag
caatttgaccaggctaaaaaacaatttcgcattcatcaagaattgggtaaagcctttggc
aaagatggtattcaggtaatgattattgaaaacattctgccccagttagaagcagaaacc
aattacattctggcaagattaaccgggaatcaacaccatatccaatttgtcacccaaaag
gagggtaaaagtagcaccaaaaacaaaccaaaaatgattaataccctagatattctcatt
gctgatgcccagggtacccgtccctatgaaacctattctggtggagaagcttttcggatt
aatttttccattcgtttagccctagctaaattattggctcaacggtctggcactgcttta
cagttactaattattgatgaaggttttggtacccaggatgcggacggttgcgatcgcctg
gtggctgccatcactgccattgcttcagattttgcttgtattctcactgtcacccacatg
ccccagtttagggaagcctttcaacagcgcattgaagtgaataagaccgagtttggttcc
caattggccattgttagctag
DBGET
integrated database retrieval system
