Synechocystis sp. IPPAS B-1465: C7I86_03450
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Entry
C7I86_03450 CDS
T05368
Name
(GenBank) trans-splicing intein-formed DNA polymerase III subunit alpha C-terminal partner DnaE-C
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
syo
Synechocystis sp. IPPAS B-1465
Pathway
syo03030
DNA replication
syo03430
Mismatch repair
syo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
C7I86_03450
03430 Mismatch repair
C7I86_03450
03440 Homologous recombination
C7I86_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syo03032
]
C7I86_03450
03400 DNA repair and recombination proteins [BR:
syo03400
]
C7I86_03450
Enzymes [BR:
syo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
C7I86_03450
DNA replication proteins [BR:
syo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
C7I86_03450
DNA repair and recombination proteins [BR:
syo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
C7I86_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF3502
Motif
Other DBs
NCBI-ProteinID:
AVP88823
LinkDB
All DBs
Position
complement(736435..737811)
Genome browser
AA seq
458 aa
AA seq
DB search
MVKVIGRRSLGVQRIFDIGLPQDHNFLLANGAIAANCFNKSHSTAYAYVTYQTAYLKANY
PVEYMAALLTASSDSQEKVEKYRENCQKMGITVEPPDINRSQRHFTPLGEAILFGLSAVR
NLGEGAIEQIITARDNSEEKRFKSLADFCTQVDLRVVNRRAIETLIMAGAFDGVQSNRNQ
LLHDLELVIAWAQKRAKEKETGQLNIFDSLTAGESIKAKEAANNGFEQEPSAPPVAEFSL
QEKLQLEKEHLGFYVSEHPLKSVQRSARLLSPINLVDLDQYKVRQKVSAVAILVAVKKII
TKKNGQPMAFLTLEDMSGQSEAVVFPSNYERLQDVLIEGSQQMIWGKVDRRDDQYQLIVE
DLEPVEEVKMVMLDLTPQEIANTSTQARLKQILQSHAPQKEQMKIPVVACINEGPTKHFI
RFGENYWVNDYGTAVASLQELGFRARLEPLLPQSQSVG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagttatcggtcgtcgttccctcggagtgcaaagaatatttgatattggtctt
ccccaagaccataattttctgctagccaatggggcgatcgccgccaattgttttaacaaa
tcccattccactgcctacgcttacgttacctaccaaacggcttatctgaaggctaactat
ccagtggaatatatggcggccctactcaccgccagtagtgacagccaggaaaaggtagaa
aaatatcgggaaaactgccaaaaaatgggcataaccgttgaaccacccgatatcaatcgt
tcccagcgccattttacccctctgggggaagctatcctattcggactttccgctgtaaga
aatttgggcgaaggggcgatcgagcaaattattaccgcccgagataattctgaagaaaaa
cgctttaaatccctagcagatttctgcacccaagtggatctacgagtcgttaaccgtcgg
gcgatcgaaacattaatcatggctggggccttcgatggagtgcagtctaatcgcaaccaa
cttttacatgatttagaattggtcattgcctgggcccaaaagcgggctaaggagaaagaa
accgggcaattaaatatctttgacagtctaactgcaggggaatccattaaagctaaagaa
gccgctaataacggttttgaacaggaaccttcggcacccccagtggcggaattttccctg
caagaaaaactacaactggaaaaggaacatttgggcttttacgtctcggaacatcccctc
aaatcagtacaacgttctgcccgcctattatctcccattaacctggtggatttagaccag
tacaaagtccgccagaaagttagtgcagtggcaattttagtagcagtgaaaaagattatc
accaaaaaaaatggtcaacccatggcgtttttaaccttggaagatatgtcgggccaatcg
gaagcggtggtgtttccttccaactatgagcgtttgcaggatgtgttaatagaaggtagt
caacaaatgatttggggcaaagttgaccgtcgggatgatcaataccagttaattgtggaa
gatttagaaccagtggaagaagtgaaaatggttatgctggacctcactccccaggagatt
gccaacaccagcactcaggcccgactaaaacaaattttgcaaagccatgccccccaaaaa
gaacagatgaaaataccggtggtggcttgcattaatgaaggaccaaccaaacacttcatt
cgttttggagaaaactactgggtgaatgattacggtactgcggtggcatccctccaggaa
ttgggtttccgagcccggttggaaccactgttaccccaaagccagagtgttggctag
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