Synechocystis sp. IPPAS B-1465: C7I86_04095
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Entry
C7I86_04095 CDS
T05368
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syo
Synechocystis sp. IPPAS B-1465
Pathway
syo03420
Nucleotide excision repair
syo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7I86_04095
03430 Mismatch repair
C7I86_04095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syo03400
]
C7I86_04095
Enzymes [BR:
syo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7I86_04095
DNA repair and recombination proteins [BR:
syo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7I86_04095
MMR (mismatch excision repair)
Other MMR factors
C7I86_04095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AVP88936
LinkDB
All DBs
Position
complement(867257..869569)
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AA seq
770 aa
AA seq
DB search
MGRLRGTLTSAIAMNQTSLNLEQLRQSLRSSQRPLADWHGGEMAVSAVPGAGKSHSLSVA
AAIAIAHHGLHNQEKLLIVTYTRSAAAAIKGKVNQRLRALGLPSLGFTVQTLHGLALSIA
LRHPEVSGLDPEQQTLVSPQKGHRLIKDAVEQWRRENPKTYQTLVEAGNFDGETTETLRR
QAVLSTEVLPELTKTVVAEAKSSGLSPQAVADMGRIAPGSELLLMGAGLFKHYQALMEAK
NWIDYNDMILAALRVLEDPHLCRQWQEQFFGVFEDEAQDSSPLQEKLLTKLAQNADGTIR
LIRVGDPNQAINSSFTPADPVYFDQFCQRCQALGSFATMDQAGRSNLQVIAAANFLLEWV
NQDWQARFNSGPKGDATLPFRPQAIRPVEPGDPQPNPPATDGGVEIRFPQDINEEVEQIR
HRLVPLLLANPHHNAAILVRENRQGRFVADRLKDVEKDGGLKVLDVGDQDRNSRIPGEIL
SLLQFIDRPHSPDLLKATLTVLQERQLIPTQDLNALAAVPEQFLYPTPLMPPLASPAVSA
QGLCRSLLKARLELPAYQLIAFLGLALNYDSSDLATLQKLSERLQVQTQPERSLKNLLSE
LHTIANDEQFEAIASDSDEKYTRPGQITIITMHKAKGLDWDYVFLPFLHQDTLPGDLWVP
KGGQFLGQFTLAEVARAQIRTVVHHRQQQKPQAIALPVTATAWQEARRLKEAEEYRLLYV
AMTRAKRLLWLSAAQEGPFAWNQMQARKSPRLQPKQPSQALLALQKRFGS
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggtagattgaggggaacactaacgtcggcgatcgccatgaatcaaacttccctgaac
ctagagcaactccgccagagtttacgcagcagtcaacgacctctggcggattggcatggg
ggagagatggccgtttccgccgtgcccggggctggcaaatcccatagtctttctgtggcg
gcggcgatcgccattgcccaccatggtttacataaccaggaaaaattgctgattgtgacc
tacacccgttcagcggcggcggccatcaaaggcaaggttaatcaacgtttacgggccttg
ggcttacccagtttgggatttacggtgcagaccctccacggtttagccctcagcattgcc
ctacgccatccggaagtatcggggctagacccggagcaacagaccctggtttcgccccaa
aaaggccatcgcttgatcaaagatgcggtggaacaatggcggcgggaaaatcctaaaacc
tatcaaaccctggtggaagcgggtaattttgacggggagacaacggaaaccctgcggcgg
caggcggtgctgagcacggaagttttacctgaattaaccaaaactgtggtggcagaagca
aaaagttctggcctctctccccaggctgtggcggacatgggtcgcattgcccccggtagc
gaactcctgctgatgggagccggtttgttcaaacattaccaagccctgatggaggcgaaa
aattggatcgactataacgacatgattttggccgccctgcgggtgctagaagatccccac
ctttgccgccagtggcaggaacaattttttggtgtttttgaagatgaagcccaggactct
agccctctgcaggaaaagttactgaccaagctggcccaaaacgccgatggtaccattcgt
ttaattcgggtgggggaccccaatcaagccattaactctagctttacccccgctgacccc
gtatatttcgatcaattttgccaacggtgccaggctttgggcagtttcgccaccatggac
caggcggggcgcagtaatttacaggtaattgcggcggccaacttcttgctggaatgggtt
aaccaagattggcaagcacggtttaatagtggtcccaaaggggatgcgaccttacccttc
cgcccccaggcaattcgtccagtggaaccgggggacccccaacccaatcctccggccacc
gatgggggagtggaaattcgttttccccaagatatcaatgaagaagtagaacaaattcgc
catcggctagtgcccctgttgttggccaatcctcaccacaatgctgccattttagtacgg
gaaaatcgccagggaaggttcgtggccgatcgcctgaaggatgtggaaaaagatggtgga
ctgaaggttttggacgtgggggaccaggatcgtaattcccgcataccaggggaaatcctt
agtcttttacaatttatcgaccgcccccattcccccgatctcctcaaagccaccttaaca
gtgttgcaggagcgccaactaattcccactcaagatttaaatgctttggcggcggtgccg
gaacaatttctctaccccactcccctgatgcctcccctggcctccccggcggtttctgcc
cagggcctatgtcgtagtttgctcaaagcccgcctggaactgcccgcctatcaattgatt
gcttttttgggtctggccctcaactatgacagctcagatttagccaccttacaaaagttg
tcggaacgtttacaggtacaaacccaacccgaacgctcattaaaaaatttgctcagcgaa
ctccacaccattgccaacgatgaacaatttgaggcgatcgccagcgatagtgatgaaaaa
tacaccagaccggggcaaatcaccattatcaccatgcacaaggccaagggattggattgg
gactatgtgtttttaccctttttgcaccaggacaccctccctggcgatttatgggtaccc
aagggagggcaatttttggggcagtttaccctagcggaggtggccagggcccaaattcgc
accgtggtacaccatcgccaacagcaaaagccccaggcgatcgccctgccggtcacggcc
accgcttggcaagaagcccgccgcctcaaggaagcagaggaataccgactactctacgtc
gctatgaccagggccaagcgtttattgtggctatccgccgcccaggaagggccctttgcc
tggaaccaaatgcaagcccgcaaatccccccgactacaacccaaacaaccatcccaggcc
ctattggccctacaaaagcgttttggttcctag
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