Synechocystis sp. IPPAS B-1465: C7I86_04100
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Entry
C7I86_04100 CDS
T05368
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
syo
Synechocystis sp. IPPAS B-1465
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
syo03036
]
C7I86_04100 (smc)
Chromosome and associated proteins [BR:
syo03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
C7I86_04100 (smc)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AVP88937
LinkDB
All DBs
Position
complement(869668..873270)
Genome browser
AA seq
1200 aa
AA seq
DB search
MVYVKRIELSHFKSFGGTTAIPFLPGFTVVSGPNGSGKSNILDALLFCLGLATSKGMRAE
RLPDLVNNTFKGNRGSSEASVSVTFELHDGENLSEPGANHNGNGNGAKISKEWTVTRRLK
VTKGGNYSSNYYINGETATVTELHEQLNELRIYPEGYNIVLQGDVTRIITMNSKERREII
DELAGVAEFDRKIVKTKETLTEVQDREERCQIIATELERTLERLAADRQKAEKYQALRQQ
VQEKQGWAKVIQYKAVEQQRQKLWGQLERDREQSQQIQQALDQRSQAIQTQQTELEKLNA
QVKALGEEEQLAVAAQLATQKAQRDQLQQRYNDGDRQITNHQQQVGQIQAEISQSQQQFL
HIQQEKSFHNTQTLPQLEAAVQTSQQQLEQLRHQAQAIASASEAWVQEQTQLSRTVNQLQ
DELIPQRSQLAQLEERQQQLLTNLAELTPLLTKVSVELEEKQFAQGQFNFQGEALTSQIQ
TLASDLAQLEQERSLLQETQTRLLKEQQEKQRQLDKLEAASQAQQEVQGTYATKVILQSD
LPGVCGLVAQLGQVEPQYQLALEIAAGGRLGFLVVEDDGVAAAGIEILKQAKAGRATFLP
LNKIRPPKGQNPNLSYAHGYIDLAVNLIDGDRRYADIFAFIFGNTIVFDTLVNARNHLGK
HRIVTLEGDLLEASGAMSGGSRNQRSGLRFGTMVSEDTAEVKQLRQRLQDIQQVQGRNEE
LLLERTVRSRQLTQQLMEMRQQQREAQLHGEQTERDIARLSQQQTQINQQQINQQQKLAE
LQQNLALLQQSLPPLEQQLASAQQQLTALETSQTHQQWQTIQIQIRTVEAEYQRQLQALR
QGEDHLKDLQNSSQRLEEKIAQAQEKIAQHQAQDLTLAQEQEQLKIALAEMNGAIQTTEA
QLAKLSEKLGSTKQERDRLETQLNQLRSQQQEQQWQWEKLQTNQQEYQENLTQLQTQLEA
LEQDLPDPWPEIPLLQDRDEANLDFANILEELERSIRNGQKRLEAMEPVNMLALQEYEKT
EARLGELSEKLQTIAGERTELLLRIENFTTLRRRSFQDAFDAVNKNFQIIFAELSDGDGY
LQLDDAEDPFNGGLNLVAHPKGKPVRRLSSMSGGEKSLTALSFIFALQRYRPSPFYGFDE
VDMFLDGANVEKLSKMVRKQAQQAQFIVVSLRRPMIEAAERTIGVTQARGAHTQVLGIKL
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atggtttatgtcaagcgcatcgaactatcccatttcaaatcctttgggggaaccaccgcc
attccttttttgccggggtttacggtggtgtctgggcccaatggttcgggcaagtcaaat
atcctcgatgcattgctattttgtttggggttagccacttccaagggcatgcgggctgaa
cgactaccggatttggtcaataacactttcaaggggaaccggggcagttccgaagctagt
gtgtcagtcacctttgaattgcatgatggggaaaacctatccgagccaggggctaaccat
aatggcaacggcaacggagcaaaaatttctaaggaatggactgttacccgtcgcctgaag
gtgaccaaagggggcaattattcctccaactattacatcaatggggagacagccaccgtc
acggaactccatgaacaattaaatgaactgcgcatttacccagagggctacaacattgtg
ctccagggggatgtgacccgcattatcaccatgaactccaaggagcgccgggaaatcatc
gatgagttggcgggggtagcggaatttgaccgcaaaattgttaaaaccaaggagactttg
acggaggtgcaagaccgggaagaacgctgtcaaattattgcgacggagttggagcgcact
ttggaacggttggcggccgatcgccagaaggcagaaaaataccaggccctgcggcaacag
gtacaggaaaagcaagggtgggccaaggttattcagtacaaagcagtggagcaacaacgg
caaaagctatggggacaattggagcgggatcgagaacaatcccagcaaattcagcaagcc
ctagaccaacgcagtcaagccattcaaactcagcaaacagagttggaaaagctcaatgcc
caggtcaaggccctgggggaagaggaacaattggccgtggcggcccagttggccacccaa
aaagcccaacgggaccaactccagcaacgttataacgacggcgatcgccaaattaccaat
caccaacaacaggtggggcaaatccaggcggaaattagccagagtcaacagcagtttttg
cacattcaacaggaaaaatccttccataacacccaaaccctgccccagctagaagccgca
gtgcagaccagtcagcaacagttggagcaactccggcaccaggcccaggcgatcgcctcc
gcttccgaagcatgggtacaggaacaaacccaactcagccgcactgtcaaccaattacaa
gacgagttaatcccccaacgcagtcagttggcccagctagaggaacgccaacaacaattg
ctaaccaatttggctgaattaacccctctgctcacaaaggtttctgttgagttggaagaa
aaacagtttgcccaagggcagttcaacttccagggagaagcactaaccagtcagattcaa
actctggccagcgatttggcccaactggaacaggaacggagtttgctacaggaaacccaa
acccgcctgctcaaagaacaacaggaaaaacaacggcaattggacaaattagaagcggct
agtcaagctcagcaggaagtgcagggcacctacgccaccaaagtgattttgcagtcggat
ttacccggggtctgcggtttagtggcccaattgggtcaggtggagccccaatatcaactg
gctctggaaattgcggccgggggccgtttgggttttcttgttgtggaagatgatggtgtg
gcggcggcgggcattgaaatcctcaaacaggccaaagcaggacgggccacttttttaccc
ctgaataaaattcgtcctcccaagggtcaaaatcccaaccttagttatgcccatggttac
attgacctggcagtgaatttaatcgacggcgatcgccgttacgccgacatttttgctttt
atctttggcaataccatcgtttttgacaccttagttaacgcccgcaaccacctgggcaag
catcgcattgtcaccctagagggagatttactagaagccagtggagccatgagtggcggc
agtcgcaaccaacgctcaggactacggttcggcaccatggtcagtgaagatacggcagaa
gtgaaacagttgcgtcaacggttacaggacattcagcaagtccaaggccgtaacgaagag
ttattgctagaaagaacagttcgtagtaggcagttaactcaacagttgatggaaatgcgg
caacaacaacgggaagcacaacttcacggagaacaaacggaacgagacatagcacgcctc
agtcaacagcaaacacaaattaatcaacaacaaattaatcaacagcaaaaactagcagag
ttacaacaaaatttagctttgttgcagcaatctttgccgcccttggaacaacagttagcc
tccgctcagcaacaattaactgccttggaaacttcccaaacccatcaacaatggcaaact
atccagatccaaattcgtaccgtggaagcggagtaccaacgccaattgcaagccctacgc
cagggggaggatcacctcaaggatttgcagaatagtagccaacgcctagaggaaaaaatt
gcccaagcccaggaaaaaattgcccaacatcaagctcaggatctcaccctagcccaggaa
caggagcagttaaaaatagctttggcggaaatgaatggggctatccaaaccacggaagct
cagttggcgaaactgtcggaaaaattgggtagtactaagcaagaaagggatcgtctagaa
actcagcttaaccagctccgtagtcaacaacaggaacagcaatggcaatgggaaaagtta
caaactaatcaacaggaataccaggaaaatttaactcaactgcaaactcaattggaagca
ttagaacaggatttgcccgatccctggccggaaattcccctgctccaagaccgggacgaa
gcaaacttggattttgccaatattttggaggaattagagcgatccattcgcaatggtcaa
aaacgtttggaagccatggaaccggtgaatatgctggcgttacaagaatatgaaaaaact
gaagctcgcctaggggaattgtcagaaaagttgcaaaccattgccggggaacggaccgag
ttactcctcaggattgaaaattttactaccctgcgtcgtcgttctttccaagatgctttt
gatgcagtcaataaaaactttcagattatttttgcagaactttctgatggggacggctac
ttacaattagacgatgcggaagatccttttaatgggggtttaaacctagtggcccacccc
aaaggtaaaccggtgcgtcgcctcagttccatgtccggtggagagaaatccttaactgcg
ctaagcttcatttttgccctccaacgctaccgcccctcccctttttatggctttgatgaa
gtggatatgtttttggacggtgccaatgtggaaaaactgtccaaaatggtccgcaaacag
gcccaacaagcccaatttattgtggtgagcctccgtcgtcccatgattgaagcggcggaa
cgcaccattggagtaacccaagcccggggagcccatacccaggttttgggcattaagttg
tag
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