Synechocystis sp. IPPAS B-1465: C7I86_04805
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Entry
C7I86_04805 CDS
T05368
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syo
Synechocystis sp. IPPAS B-1465
Pathway
syo03420
Nucleotide excision repair
syo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C7I86_04805 (pcrA)
03430 Mismatch repair
C7I86_04805 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syo03400
]
C7I86_04805 (pcrA)
Enzymes [BR:
syo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
C7I86_04805 (pcrA)
DNA repair and recombination proteins [BR:
syo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C7I86_04805 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
C7I86_04805 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
Viral_helicase1
ResIII
AAA_11
Helicase_RecD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AVP89054
LinkDB
All DBs
Position
complement(1022278..1024659)
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AA seq
793 aa
AA seq
DB search
MPMTVVPDYLAHLNPSQRRAVEHFCGPLLVVAGAGSGKTRALTYRIAHLIRQHRINPENI
LAVTFTNKAAKEMKERLEKIFAQAWAQQEFSQRWELLGKYEQKQLLSRVYKTVTKPLWIG
TFHSLCSRILRYDIDKYQDSSGRRWTKQFSIFDESDVQSLFKTIVTKDMDLDEKQFNPKS
IRYQVSNAKNLGQSPETYLRENPSYKGRVIAEVYQAYQNQLAANNALDFDDLILIPTRLF
QQNESVLGYWHRKFNHILVDEYQDTNRIQYDLIRLLSTNGEERQSEWDWRGRSTFVVGDA
DQSIYSFRMADFTILLNFQEDFGDRLLDGETTTMVKLEENYRSRENILQAANHLIEHNSQ
RIDKILKATRSGGDDIILYQADDERDESRFVINKILSLRKNNPELNFGDFAILYRTNAQS
RAFEEQLLNNNIRYNIVGGFRFYDRQEIKDAIAYLRVLVNPADTVSLLRIINTPRRGIGK
STIEGFVNASKELDIPLWEIITDETSVNTLAGRSGKKTLQFARMLQEIQSQIGELSASEA
LSLVLEKSNYVDDLKQKGTEEADNRLANLGELDNAVRQFEAESEDPSLVDFLASASLTSD
LDDLEESGDEVSLMTLHSAKGLEFPVVFLVGLEQGTCPHARSLNDPLDLEEERRLCYVGI
TRAQENLFLTHARMRYIWGSLETKIPSQFLQELPPDLLADGSTGRRTGRNAPAADPKGPS
IAQKQARKKTGSQSTQPAKDLIWNVGDRVMHNNFGEGTVTHILGKGHKANLAIKFPGIGV
KIIDPSFAPLRRL
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
gtgcccatgactgttgtccccgactaccttgcccacctcaatccttcccaacggcgggcg
gtggagcatttttgtggccctcttttggtggtggccggggccggctcagggaaaactagg
gcactaacctaccgcattgcccatctaattcgtcagcatcgcatcaatccggaaaatatc
ctggcggtaacctttaccaataaagccgccaaggaaatgaaggaacgtttggaaaagatt
tttgcccaagcctgggcccaacaggaatttagccaacggtgggaattgttggggaaatat
gaacaaaaacagttgctttccagggtgtacaaaacagttacgaaacccctctggattggc
actttccacagtctatgttctcgtattctccgctacgacattgataaatatcaggacagc
agtggccgccgttggacaaaacagttttccatttttgatgaaagtgacgtgcaaagtttg
tttaagaccattgtcactaaggatatggatttggacgaaaaacagttcaatcctaagagt
attcgctaccaggtcagtaatgccaaaaacctcgggcaatcaccggagacctatctaagg
gaaaatcccagttataaaggtagggtcattgcggaagtttaccaagcttaccaaaatcaa
ttggccgctaataacgctctagattttgatgatttaattctcatccctacccgtttattt
caacaaaatgaatcagttttaggctactggcaccgaaaatttaaccatattttggtggat
gaataccaagacactaatcgcatccaatatgatttaattcgtctgctgagcaccaatggg
gaagaacggcagtcggagtgggattggcgggggcgttccacttttgtggtgggggatgca
gaccaatctatttacagtttccgcatggcagactttaccatcctgctcaatttccaagag
gattttggcgatcgcctgttggatggggaaacgaccaccatggtcaaactagaggaaaat
taccgttctcgggaaaatatcctccaagcggctaaccatttaattgaacataatagccaa
cggattgacaagatcctcaaggctacccggagtggcggagatgatattatcctttaccag
gcggatgatgaaagggatgagtcccgttttgtgattaataaaattctgagcttaaggaaa
aataacccagaattaaattttggtgattttgctattttatatcgcaccaatgcccaatcc
cgggcctttgaagaacagctattaaataataatattcgctacaatattgtcggtggtttt
cgcttctacgatcgccaggaaattaaagatgccattgcctatctccgggtgttagttaat
ccggcggatacggtcagcttgttgcgtatcatcaatactccccggcggggcatcggtaaa
tccaccattgaaggttttgttaatgcctctaaggaattggacattcccctgtgggaaatt
attaccgacgaaacttcggtgaatactctggccgggcgatcaggtaaaaaaaccctgcaa
tttgcccgcatgctccaggaaatccaaagccaaattggtgagctttctgcgtcggaagcc
ctcagcttagtgttggaaaaatccaattatgtggacgacttaaagcaaaaaggcaccgaa
gaagcggataatcgcctggccaacctgggggaattggacaatgcagtgcgacagtttgaa
gcagaaagtgaagaccctagcctagtggattttttggcttcagcatccctcacttccgac
cttgatgacctggaggaatccggagacgaagtgtccctcatgactctccactctgctaag
ggcctggaatttccagtggtcttcttagtggggttggagcagggcacttgcccccacgcc
cgcagtttaaatgatcctttggatctagaagaggaacgccgtttatgttacgtgggcatt
accagagcccaggaaaatctctttttgacccatgctcgcatgcgttacatctggggttct
ttagaaaccaaaataccgtcccaatttctccaggaattaccaccggatttattggccgat
ggctcaactggtcgtagaactggtcgcaatgctcctgccgccgatcccaagggaccttcc
attgcccaaaaacaagcccgaaaaaaaactggttcccagtccactcaaccggctaaagac
ctaatctggaatgttggcgatcgggtaatgcacaacaattttggagaaggcactgtgacc
cacattttaggcaaaggccataaagctaatttggccatcaaatttcccggcattggtgtg
aaaattattgaccccagtttcgcccctctacgccgcctttga
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