Synechocystis sp. IPPAS B-1465: C7I86_09830
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Entry
C7I86_09830 CDS
T05368
Symbol
rnc
Name
(GenBank) ribonuclease 3 1
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
syo
Synechocystis sp. IPPAS B-1465
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
syo03019
]
C7I86_09830 (rnc)
03009 Ribosome biogenesis [BR:
syo03009
]
C7I86_09830 (rnc)
03036 Chromosome and associated proteins [BR:
syo03036
]
C7I86_09830 (rnc)
Enzymes [BR:
syo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
C7I86_09830 (rnc)
Messenger RNA biogenesis [BR:
syo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
C7I86_09830 (rnc)
Ribosome biogenesis [BR:
syo03009
]
Eukaryotic type
90S particles
RNase
C7I86_09830 (rnc)
Prokaryotic type
rRNA processing factors
C7I86_09830 (rnc)
Chromosome and associated proteins [BR:
syo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
C7I86_09830 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AVP89939
LinkDB
All DBs
Position
2072220..2072915
Genome browser
AA seq
231 aa
AA seq
DB search
MNHPDFPPIGDPQLKLEALTHRSYCNEHPGTPSYDRLEFLGDAVLGFVVGRILFERYPHF
TEAELTRLRSQLVNQNQLAYLARFLHIAPEIRLSQSLARDDGQSSPSILADVFESLLGAA
LLDRGLTAVEDFIQELFVPILEQWEKSQDGRSPKLVPTMDVKSMLQQWALAKTKQLPEYE
LINTSGPPHAQEFTFTVKVAGKIHGQGSGPSKQIATKQAALEALKSLGLLQ
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatcccgatttcccccccatcggggacccccagttaaaactcgaagccctcacc
catcgttcctattgcaacgaacatcctggtactccttcctatgaccggctggaatttctt
ggggatgcggtgttgggttttgtggtggggcgcattctttttgaacgttatccccatttt
actgaggcagagttaacccgtctgcggtcccagttggttaatcaaaatcagttggcctat
ctagcgaggtttttacacattgcgccggaaattcgcctgagccaaagtttggccagggac
gatggacaatccagcccttccatcctggccgatgtttttgaatcattgttgggggcggct
ctcctggataggggtttgacggcggtggaagatttcattcaagaactattcgttcccatc
ctagagcagtgggaaaaaagccaggatgggcgatcgccaaaactagtgccgaccatggat
gtaaaaagcatgctccagcagtgggccttggccaaaactaaacaattgccagaatatgaa
ctaatcaacaccagtgggccaccccatgcccaggaatttacctttaccgtcaaagtagcg
ggaaaaatccatggccaaggctctggccccagtaagcaaattgccaccaaacaggcagcc
ctagaggcattgaaaagtttggggctattgcaataa
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