Synechocystis sp. IPPAS B-1465: C7I86_13570
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Entry
C7I86_13570 CDS
T05368
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
syo
Synechocystis sp. IPPAS B-1465
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syo03009
]
C7I86_13570 (rimO)
Enzymes [BR:
syo01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
C7I86_13570 (rimO)
Ribosome biogenesis [BR:
syo03009
]
Prokaryotic type
ribosomal protein modification factors
C7I86_13570 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
B12-binding
DUF5005
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AVP90609
LinkDB
All DBs
Position
2887023..2888354
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AA seq
443 aa
AA seq
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MGQTPTIAINHLGCEKNRIDSEHMLGLLVEAGYQVDANEELADYVIVNTCSFIQDARQES
VRTLVELAEAKKKIVISGCLAQHFQEQLLEEIPEAVAVVGTGDYQNIVDIIRRTEQGQRV
KAISPNPSFIADENLPRYRTTNEAIAYLRVAEGCDYRCAFCIIPQLRGKQRSRPIESIVA
EAEQLASQGVKELILISQITTNYGLDLYGEPKLAELLQALGKVDIPWIRIHYAYPTGLTP
KVIEAIRDTPNVLPYLDLPLQHSHPDILRAMNRPWQGQVNDDIITRLKTALPDAVLRTTF
IVGFPGETEEHFGHLLDFVQRHQFDHVGVFTFSPEEGTAAFDLPNAVPEEVMGDRRDRLM
ALQQPISAQKNAACLGQTLDVLIEQENPSTGEFIGRSTRFAPEVDGLVYVKGNANLNEIV
PVVITATDDYDLYGMTAEEAKVF
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgggccaaacgccaacgatcgccatcaaccatttgggttgcgaaaaaaaccgcattgat
tctgaacatatgttaggcctgctggtggaagcgggttaccaagtcgatgccaatgaagaa
ttagcagattacgtcattgttaatacctgtagttttatccaggatgctcgccaggagtcg
gtgagaaccttagtagaactagcggaagcaaagaagaaaatcgttatttccggttgcctg
gcccagcatttccaggagcaacttttagaagaaattcccgaagcggtggccgtggtgggc
accggggattaccaaaatattgttgatattattcgacgcacggaacagggtcagcgagtt
aaagccatttcccccaatcccagtttcatagccgacgaaaatttgccacgttatcgcacc
accaacgaggcgatcgcctatctgcgggtggcggaaggctgtgattatcgctgtgctttt
tgcatcatccctcaactacggggcaaacaacggtctcgcccgattgaatctattgtggcg
gaagccgaacaactggctagccaaggggtaaaggaattaattctcatctcccaaatcacc
accaattatggattggatctgtatggggagccgaaactggcagaactattacaggccctg
ggtaaagtcgatattccttggattcgtattcactacgcctatcccaccggattgaccccc
aaagtaattgaggcaattcgggatactcccaacgtcctcccctatttggatttacccctg
caacattcccatcccgacattctcagagccatgaatcgcccctggcagggccaagtcaac
gacgacatcatcactagactaaaaactgcccttcccgacgctgtgctacgtaccaccttc
attgttggttttcctggggaaaccgaggaacattttgggcatttgctagactttgtccaa
cgccatcaatttgaccatgtgggagtgtttactttttccccagaggaaggcaccgccgcc
tttgatctgcccaatgctgtgcccgaagaagtaatgggcgatcgccgggatcggttaatg
gctctgcaacagcccatttccgcccagaaaaatgccgcttgtttggggcagaccctggat
gtgctgatcgagcaggaaaatcccagcactggggaattcatcggccgatcaacccgcttt
gctccagaggtggacggattagtctatgtcaagggcaatgccaatttgaatgaaatcgtc
ccggtcgtgatcactgccaccgacgattatgacctgtacggtatgaccgccgaggaggct
aaggttttttag
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