Synechocystis sp. IPPAS B-1465: C7I86_15510
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Entry
C7I86_15510 CDS
T05368
Name
(GenBank) RNA polymerase sigma factor SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
syo
Synechocystis sp. IPPAS B-1465
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C7I86_15510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syo03021
]
C7I86_15510
Transcription machinery [BR:
syo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7I86_15510
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
MJ0093
Motif
Other DBs
NCBI-ProteinID:
AVP90961
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Position
3324115..3325392
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AA seq
425 aa
AA seq
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MTQTKEPLTKAESAELEQEIELSQYINTDDIDDDDIDVEDLEQEVAATEGKEKKVRKIRK
DAVKKKPYTEDSIRIYLQEIGRIRLLRAEEEIELARQIADLLELELIRDNLTLQLERQPS
ELEWGKQVWKLETAKQRLVGDKKKEPKKKDIDSYLANPDNELSLENEWSQQPNKNFAAFR
RRLFLDRRAKDKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYK
FSTYATWWIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKLLSQEMRRKPTEEEIAEK
MEMTIEKLRFIAKSAQLPISLETPIGKEEDSRLGDFIEADGETPEDEVSKNLLREDLENV
LDTLSPRERDVLRLRYGLDDGRMKTLEEIGQIFNVTRERIRQIEAKALRKLRHPNRNSIL
KEYIR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgacccagacgaaagagccactcaccaaagctgaatccgccgaactggagcaagaaata
gagctaagtcaatacattaacactgatgatattgacgacgatgatattgacgtagaggat
ttagaacaggaagtcgccgctacagaagggaaggaaaaaaaagtccggaaaattcgtaag
gacgcggttaaaaagaaaccctacaccgaagactcaatccgtatctatctccaggaaatt
ggccggattcgtctgctcagggccgaagaagaaattgaactagcccgtcaaattgccgac
ctcctcgaactcgagctaattcgggacaacctcacccttcaactagaacgccagccctcg
gaactggaatggggtaaacaggtctggaagttggaaaccgccaaacaacggttagtaggc
gacaagaaaaaagagccgaaaaagaaagatatagatagttacctcgccaatccagacaac
gaattaagtctggaaaatgaatggagccaacagcccaacaaaaattttgccgccttccgt
cgtcgtctttttctggatcgccgagccaaagacaaaatggtgcagtctaacctgcggcta
gtagtgtccattgccaaaaaatatatgaatcggggtctatcattccaagatctaattcag
gaaggttctctaggtttaatccgagctgccgaaaaatttgaccacgaaaaaggttacaaa
ttctccacctatgccacctggtggattcgccaagccatcacccgggcgatcgccgaccaa
tctcgcaccatccgcctccccgtccacctctacgaaaccatctcccgcatcaaaaaaacc
accaaactcctctcccaggaaatgcgacgtaaacccaccgaggaagaaatcgccgaaaaa
atggagatgaccatcgaaaaattacgcttcatcgccaaatccgcccaacttcccatctcc
ctcgaaacccccattgggaaagaagaggactcccgcctaggggacttcatcgaagccgac
ggcgaaacccctgaggatgaagtatccaaaaatctgctccgggaagacctggaaaatgtc
cttgacaccctcagcccccgggaacgagacgtattgcgtctacgctatggcctcgacgac
ggccgcatgaagaccctagaagagattgggcaaatctttaacgtcacccgggaacgcatc
cgtcagatcgaagctaaagccctgcggaaactgcgtcaccctaaccgcaacagcatcctc
aaggaatatatccgctaa
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