Synechocystis sp. IPPAS B-1465: C7I86_15710
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Entry
C7I86_15710 CDS
T05368
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
syo
Synechocystis sp. IPPAS B-1465
Brite
KEGG Orthology (KO) [BR:
syo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syo03021
]
C7I86_15710
Transcription machinery [BR:
syo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C7I86_15710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
HTH_23
HTH_Crp_2
HTH_17
DUF134
LacI
SpoIIID
PhyR_sigma-like
KORA
Motif
Other DBs
NCBI-ProteinID:
AVP90990
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All DBs
Position
3372087..3372863
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AA seq
258 aa
AA seq
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MTNATSESLKLETLRLFKIYAESHDIGVRNRIMEVNLGLVRKEAHHWTAQCNESFEDLSQ
VGCLGLIRAIERFDVSKGNAFSSFAIPYVRGEIQHFLRDKSNCVRIPRRWLDLGRQAIAV
QQEFRLKYDRAATDEEIAQILAVPLADWQETKLALQNRELVSLDTKVNGDDEGQVNLGDC
LAHHEFRSFQLSQEDQIRLQQALAGLEERTRRIVEFVFLHDFTHKEAAEMMGVSVITVSR
RIKQGIGALKKALNTEIF
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgccaccagcgaaagcctcaaacttgagactctgagactgttcaaaatctac
gcagagtcccacgatattggcgtgcgtaatcggattatggaagtcaatctgggtctggtg
agaaaggaagcgcaccattggacggcccagtgcaatgaaagttttgaggatttgtcccag
gtggggtgtttgggtctgatccgagccattgaacggtttgatgtgagtaagggcaatgcc
tttagctcctttgccattccctatgtgcggggagaaatccagcattttctgcgggataaa
agtaactgtgttcgtattccccggcgttggttagatttgggtcgtcaggcgatcgccgtc
cagcaggaatttcgcctcaaatatgaccgggcggccacggacgaggaaattgcacaaatt
ttagcagtgcccctggcggactggcaggaaaccaaactggcgctgcagaatcgtgaactg
gtgagtttggacaccaaggtaaatggcgacgatgaaggacaagttaatctgggggattgt
ttagcccaccacgaattccgtagttttcaactcagccaggaagatcaaatccgtctgcaa
caggccttagccggtttggaagaacgtacccgccgcattgtggaatttgtttttctccac
gactttacccacaaggaagccgccgaaatgatgggggttagtgtgattaccgtttcccgt
cgcattaaacagggcattggggctctgaaaaaagccttaaatacggaaattttttaa
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