Synechocystis sp. IPPAS B-1465: C7I86_16270
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Entry
C7I86_16270 CDS
T05368
Name
(GenBank) RNA helicase
Organism
syo
Synechocystis sp. IPPAS B-1465
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
DEXQc_Suv3
nSTAND3
ATPase_2
IstB_IS21
nSTAND_NTPase5
AAA_22
AAA_30
AAA_19
MTR4-like_stalk
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AVP91090
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Position
3494725..3497745
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AA seq
1006 aa
AA seq
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MKTLAYANPADLFAFPLDDFQQEAIAALDQDQSVVVCAPTGSGKTVVGEYAIYRAIARGK
RVFYTTPLKALSNQKIRDFQEKLEKLGLENAAQLVGLITGDTVINADAPVVVMTTEIFRN
MLYETPIGEVGTSLEDVETVVFDEVHYISDRGRGTVWEESIIYCPSTIQLVGLSATIGNP
EQLTEWINQVRTGVSLKVLRQGEQRNDSPPCVLVNSDFRPVPLTFHYSTRKGLFPLLNEK
KTGVNTRLLPKAGNKNTRSGKNRRMRREDCPYPLLVMQQLQERNLLPVIYVIFSRRGCEQ
AAQSLEDLSLVEPAEQESIQLQLLDFFFGKNPLLRQKLERDLANGLPDLVQAVVAYLDHP
QDSEAAQRLLTALAIDPEGMFKLWGWIAQSSPMTRFEQIEPLLRGIAVHHAGILPDMKTL
VEKLFEQGLIKVVFATATLSAGINMPARTTVISALSKRTNEGHAMLSPSEFLQIAGRAGR
RGMDTEGHVITVQTPFEGANEASYLALAEAEPLKSWFTPSYGMVLNLLQKHDLEEVKSLL
ERSFAEYLAQFALEPTKVAIAETVKKLSQLDIKLAGIGEKDLRSYEKFRGRLREEQRLLK
ILEEQAEKERKQQLKDQLKTLAPGQLLYLKGRHVKIHQPRLAVIVAPLAPAHNLPQWCCL
GSDNRWYHVTVGDIYAVPIGNLSPAQWQHLTPPPAELLAPGKSVKGDEETLAIAAGLDPQ
TYPLEPSPELVEQQARVDHVEKLLAVHPLASQKHPGKLLEQFHQRQELRKTLSKRQQEYD
RLQSRQSYYWQEFLDLIDILQEMEALEEYTPTLLGEVAATLRGENELWLGLALISGKFND
LEPEQLAAAASALITETPRSDAWTDFKPSPVVLAALRPSNDLFGLLFCLKHPQPPLALWQ
AMTVADHLQRLNLWDLRRKLIKAQNQRAIAIPLWLEVDFMGLVEQWALGMEWENLCRQTS
LDEGDLVRLFRRTVDLLWQIPQVPHLSPRLKRNARIAVQQMKRFPL
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaccctagcctacgctaaccctgctgatctattcgcctttcccttggatgacttc
caacaagaggcgatcgccgccctggaccaagaccagtcagtggtagtgtgtgcccccaca
ggttccggtaaaacggtagtcggagaatatgccatctatcgagccattgccaggggaaaa
agggttttttatactacgcctttgaaggccttgtccaatcaaaaaattcgggatttccag
gaaaaattagagaagttaggcctagaaaatgcggcccaactagtgggcttaattaccggt
gatacggtgatcaatgccgatgccccggtggtggtaatgaccacggaaatttttaggaat
atgctctacgaaacccccattggggaagtaggcacttctttggaggacgtggaaacagtg
gtgtttgacgaagtccattacatcagcgaccggggtcggggcactgtgtgggaagagtca
atcatttattgtcccagcaccattcaactggtgggtttgtccgccaccattggcaacccg
gaacagttgaccgaatggattaatcaagtccgcactggggtttccctgaaagtattacgc
cagggagagcaacgtaatgattcccccccctgtgtgctggtcaattccgatttccgtcct
gtgcccctcacctttcactacagcacccgcaaaggtttatttcccctgttgaatgagaaa
aaaacgggagttaatactcgcctattgcccaaggctgggaataaaaatacccgttctggt
aaaaatcgccgcatgcgccgggaggattgtccctatcccctgttggtgatgcaacagcta
caggaacggaatttgttgccggtaatctatgtaatttttagtcggcggggctgtgaacag
gcggcccaatccctggaagatttatctttggtggaaccggcggagcaggaaagtatccaa
ctgcaactactggattttttctttggcaaaaatcccctactgcggcagaagttggaacgg
gatttggccaatggtttgccggatttagtccaagcggtcgttgcctatttggatcatccc
caggacagtgaagcggcccaaagacttttgactgcgttggcgatcgatccagaaggtatg
ttcaaactctggggttggattgcccaatcttctcccatgactaggttcgagcagattgaa
ccccttttacggggcattgcggtgcaccacgccggcattttgccagatatgaaaaccctg
gtggaaaagttatttgagcagggcttgatcaaagtggtatttgccacagccaccctctcg
gcggggattaatatgcctgctcgcaccacggtgatttctgccctatccaaacgtaccaat
gaaggtcatgccatgctcagtccttcggaatttttacaaattgcggggcgggctgggcgg
cggggtatggatacggagggccatgtaattacggtgcaaactccctttgaaggggccaat
gaggcctcttacttagctctagcggaggcggaaccgttaaaaagttggtttaccccttcc
tatggcatggtgctgaatctgttgcaaaaacatgatttggaagaagtaaaaagtttgctg
gaacggagctttgccgaatacttggcccagtttgccctggaacccactaaggtggcgatc
gccgaaacggtgaaaaaattatcccaattggatattaagttggcaggcattggggaaaag
gatttacgcagttacgaaaaattccgggggcgactgcgggaagaacaaaggttgctgaaa
attctggaagaacaggcggaaaaagaacgaaagcaacagttaaaggatcaactcaaaacc
ctggcaccgggtcagcttttatatctcaaaggtcgccacgtcaaaatccatcaacctcgt
ttagcggtcattgttgcccccctggcccccgcccataatttgccccaatggtgctgcctg
ggcagtgataaccgttggtatcatgtcactgtgggggatatttatgcggtgcccattggt
aatctgtccccagcccaatggcagcatttaaccccgcccccagcggaacttttggctccc
ggtaaatcggtgaagggagatgaggaaacattggcgatcgccgcaggcctagacccccaa
acctatcccttagaacccagcccagaactggtagaacaacaggccagggtagaccatgtg
gaaaaactgttggcagtacatcccctggctagccaaaaacatcccggcaaacttttggag
cagttccaccaacggcaagaactacgtaaaaccctaagcaaacgacaacaggagtatgat
cgcctacaatcccgtcaatcctactattggcaggagttcctagacttaattgacattttg
caggaaatggaagccctggaggaatatacccccacactgttgggggaagtggccgccacc
ctgaggggggaaaatgaattgtggttgggtttggccctgatttccggcaaattcaacgat
ttggaaccagaacagttggccgccgccgccagtgccctcattacggaaactccccgttcc
gatgcttggactgatttcaagccttcccctgtagtgttggccgctctccgtcccagtaat
gatttgtttggcctattattttgccttaaacaccctcaacctccccttgccctctggcag
gctatgacggtggcggatcatttgcaacggcttaatctctgggatctacgacgtaaattg
atcaaagctcaaaatcaacgggcgatcgccattcccctttggttggaagtggattttatg
ggcttggtggaacagtgggcattgggcatggagtgggaaaacctctgccgccagaccagt
ttggatgagggggatttagtccgacttttccggcgcacggtggatctgctttggcaaatt
ccccaggtgccccacctttccccccgactaaaacggaatgctcgcattgcggtgcaacaa
atgaagcgttttcccctctaa
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