Shewanella youngdeokensis: RGE70_00065
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Entry
RGE70_00065 CDS
T10660
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
syou Shewanella youngdeokensis
Pathway
syou00071
Fatty acid degradation
syou00280
Valine, leucine and isoleucine degradation
syou00310
Lysine degradation
syou00362
Benzoate degradation
syou00380
Tryptophan metabolism
syou00410
beta-Alanine metabolism
syou00640
Propanoate metabolism
syou00650
Butanoate metabolism
syou00907
Pinene, camphor and geraniol degradation
syou00930
Caprolactam degradation
syou01100
Metabolic pathways
syou01110
Biosynthesis of secondary metabolites
syou01120
Microbial metabolism in diverse environments
syou01200
Carbon metabolism
syou01212
Fatty acid metabolism
Module
syou_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RGE70_00065 (fadB)
00650 Butanoate metabolism
RGE70_00065 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
RGE70_00065 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RGE70_00065 (fadB)
00310 Lysine degradation
RGE70_00065 (fadB)
00380 Tryptophan metabolism
RGE70_00065 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RGE70_00065 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RGE70_00065 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RGE70_00065 (fadB)
00930 Caprolactam degradation
RGE70_00065 (fadB)
Enzymes [BR:
syou01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RGE70_00065 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RGE70_00065 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RGE70_00065 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
RGE70_00065 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
WOT05264
UniProt:
A0ABZ0K0I4
LinkDB
All DBs
Position
complement(16056..18209)
Genome browser
AA seq
717 aa
AA seq
DB search
MIYQSPTIEVELLDDNIAHLCFKAQGSVNKFDRETINSLNAALDSIKQNNTIQGLMLTSA
KSAFIVGADITEFLTLFAEDDSVLMNWLEEANAVFNKLEDLPFPTISAINGFALGGGCET
ILATDFRVADTTARIGLPETKLGIIPGFGGTVRLPRVIGADNAIEWITTGKDQRPEAALK
VGAIDALVAPEQLQSAALQMLKDAIAEKLDWQSRRARKQSPLTLPKMEAMMSFATAKGMV
FKVAGKHYPAPMAVISVIEKAAQLDRDSALQVEHQAFLKLAKTEVAQALIGIFLNDQLVK
GKAKKAGKLARKFDSAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALDLGLGEASKLL
ATQIKRGRSTPAKMAAVLNNITPALDYAPVKSADVIVEAVVEHPKVKSMVLAEVEEHVSE
DTIITSNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEDSSEETIASVVAY
ASKMGKSPIVVNDCPGFFVNRVLFPYFAGFSGLLADGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPERMGKSGKDAIDIMFDANRFGQKNSKGFYQYSVDRRGKP
KKDLDPTSYELLQAEFGELKSFESDEIIARTMIPMIIETVRCLEEGIIATPAEADMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQQA
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctacaattgaggttgagttacttgacgacaacatcgctcatttg
tgctttaaagcacaaggttcggtcaataagttcgatagagaaaccatcaactctttaaat
gctgcgctcgacagcatcaagcaaaacaacaccatccaaggtttaatgctcacttctgct
aaatccgcatttatcgtgggtgcagatatcactgagttcttaactttatttgcagaagat
gattcggttctaatgaattggttagaagaagctaatgctgtttttaacaaattagaagat
ttaccgtttccgactatttcagcaatcaatggctttgcactaggcggtggttgcgaaacc
attcttgccaccgatttccgcgtagcagataccacggctagaataggcctaccagaaacc
aagcttggtatcattccaggttttggtggtaccgtgcgcttacctcgcgttattggtgca
gataatgctattgagtggatcaccacgggtaaagaccaacgcccagaagcggcactaaaa
gtcggtgccattgatgcactagtggcgccagagcaactacaaagcgctgcgttacaaatg
ctaaaagacgcaatcgcagaaaagctagattggcaatcacgtcgcgctagaaagcaatca
ccacttacgctaccgaaaatggaagcgatgatgtcgtttgcaacagcaaaaggcatggta
tttaaagtagcaggcaaacattaccctgcaccaatggctgtaattagtgtaatcgaaaaa
gcagcacagcttgaccgcgacagcgcattacaagttgaacaccaagcattcttgaagtta
gccaaaacagaagtagcccaagcgttgattggtattttcttgaacgaccaactcgtaaaa
ggtaaagctaaaaaagccggcaagttggcgagaaaatttgactccgctgccgtgcttggc
gccggtatcatgggcggtgggattgcgtatcaaagtgccagcaaaggtacaccaattgta
atgaaagatatcgcccaacctgcacttgatttagggttaggcgaagcctctaaattgcta
gctacacaaattaaacgtggccgttcaacaccggcgaaaatggcagcagtgttaaacaac
ataaccccagcccttgattatgcaccggtaaaatcggcagacgtgattgttgaggccgtt
gttgaacaccctaaggttaagtcaatggtattggctgaagttgaagaacatgtcagtgaa
gacacaattattacctcaaacacttcaaccatttcaatcaacctactcgcaaaaagcctt
aaaaagcctgagcgcttctgtggtatgcacttctttaacccagtgcacaaaatgccccta
gtagaaatcattcgtggtgaagacagttcagaagaaacgattgcatctgtcgttgcttac
gccagtaaaatgggcaagagccctattgttgtaaacgactgcccaggtttctttgtaaac
cgcgttctgttcccttactttgccggctttagcggcctgcttgctgatggtggcgatttc
gctgcaattgataaagtcatggaaaaacagtttggctggccaatgggccctgcttatcta
ttagatgtagtaggcctagatacgggacatcacgctcaagcagttatggcagaaggcttc
cctgagcgcatgggtaagtcaggtaaagatgctattgatattatgttcgatgctaatcgc
tttggtcagaaaaacagcaaaggtttttatcagtattcggtagatcgtcgcggcaagccg
aagaaagatttagatccaacaagctatgagttacttcaagctgaatttggagagctaaaa
tcatttgagtcagacgaaatcatcgctcgcacaatgatcccgatgattatcgaaacagta
cgctgtcttgaagaaggtattatcgctacccctgctgaggcagatatgggcttagtttat
ggtattggtttcccaccatttagaggcggtgtattccgttacctagataccatgggggtt
gctaactttgttgcattagccgacaaatacgcccacctaggtggtctatatcaagtaacc
gacgctatgcgcgaactcgccgccaacaatggcagctactaccagcaggcttaa
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