Shewanella youngdeokensis: RGE70_00105
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Entry
RGE70_00105 CDS
T10660
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_00105 (rsmB)
Enzymes [BR:
syou01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
RGE70_00105 (rsmB)
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGE70_00105 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
Methyltransf_5
MTS
Methyltransf_37
FtsJ
Methyltransf_11
Cons_hypoth95
GEX2
Motif
Other DBs
NCBI-ProteinID:
WOT07064
UniProt:
A0ABZ0K4R9
LinkDB
All DBs
Position
complement(25505..26785)
Genome browser
AA seq
426 aa
AA seq
DB search
MNLRALAAKVVFQVLEKGISLSVALPDQQRHLESGKDKALLAELSYGVMRHLPQLDKQVS
DCISKPLKGKQRIVHQLLLVGCYQLYFTRIPSHAAISETAEACRQLKFEGMVKVVNGVLR
NIQRQEKPLSTDNDTLAHNTPAWIIKRLKAAYPDNWQHVIEQSHQRPPMWLRNNQQSQTR
DEYLTALTDANVEATAGSSNDAILLTSPRDVMQLPGFETGAASVQDGAAQWAATLLAPQG
EERVLDACAAPGGKTCHLLELAPNIKLVAVDNDAKRLERVQQNLDRLSLEAELIHGDAAN
IDSWWQGDKFDRILLDAPCSATGVIRRHPDIKWLRKNNDIEELASLQSQIFDHCWQWLKP
GGTLLYATCSILPQENKDQVSAFLQRTPDATLVPITQQANPSDIGWQILPGQENMDGFYY
ARLVKD
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacgagcgctagccgctaaagtggtatttcaggttcttgaaaaaggcatatct
ttgtcagtcgccctgcccgaccagcaacgacacctcgaaagtggcaaagacaaagcctta
ctagcagaacttagctacggcgtgatgcgtcatttaccgcagctagacaagcaagttagc
gactgcattagcaagccactcaaaggcaagcaacgcattgttcaccaactgctactcgtt
ggctgctaccaactgtattttacccgcattccgagccatgccgcgatttcagaaacggca
gaagcatgccgccaattaaagtttgaaggaatggttaaagtcgtcaatggcgtattacgt
aatattcagcgtcaggaaaaaccgctttcaacagacaatgatacgctagcgcataacacg
ccagcatggatcattaaacgccttaaagccgcttacccagacaactggcaacacgttatt
gagcaaagccatcaacgtccgccaatgtggctgcgcaacaatcaacaatcacaaacacgt
gatgaatatctaacagcactaaccgatgctaatgttgaagcaaccgcgggcagtagcaat
gacgccatcctgctcaccagcccacgcgatgtaatgcaactgccaggctttgaaaccggt
gctgcttctgtacaagatggtgcagcacaatgggcagctacattgcttgcccctcaaggc
gaagaacgagtacttgatgcctgtgcagcccccggcggtaaaacctgtcatttacttgaa
ttggcaccaaacataaaattggtcgccgttgataatgatgcaaaaagattagagcgcgtc
caacaaaacctcgatagattatcactggaagcagaattaattcatggtgatgcagctaat
attgactcttggtggcaaggtgataaatttgatcgcattttattagatgcgccctgctca
gcaacaggcgttatacgtcgccacccagatattaagtggcttagaaaaaacaatgatatt
gaagagctagcatcgctacaatcacagatattcgatcattgttggcagtggctaaaacca
ggtggcaccctgttgtatgcaacctgttctattttaccgcaagaaaataaagatcaagtc
agtgcgtttttacaaagaacacctgacgcgactttagtgccaattacgcaacaagccaac
ccaagtgatatcggttggcagattttgccagggcaggaaaatatggacggattttattac
gctcgccttgtgaaggattag
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