Shewanella youngdeokensis: RGE70_01020
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Entry
RGE70_01020 CDS
T10660
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
syou03021
]
RGE70_01020 (rpoH)
Transcription machinery [BR:
syou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RGE70_01020 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
WOT05442
UniProt:
A0ABZ0K011
LinkDB
All DBs
Position
230218..231075
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AA seq
285 aa
AA seq
DB search
MTDQTQTMALMVPQSSGSLESYIHSAHSISMLDVEEEQQLARRLQETGDLQAAKQLIMSH
LRFVVHVAKGYSGYGLPQADLIQEGNIGLMKAVKRFDPDVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKSKKRLGWFSDNEVGMVAETLGVSKSDVTEMESRMAA
QDPAFDLASDNDDEQDYAPMHYLEDHSSDLASQVENDNWEQSNQERLLSAIKTLDERSQH
ILQARWLNEDKTTLQDLAATYQVSAERIRQLEKNAMNKLKGRMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaaacgcaaacaatggcactgatggttccacaaagtagtggcagcctcgag
tcttatatccactcggcacacagcatttcgatgttggatgtggaggaggagcaacagctt
gcgcgacgtttacaggaaaccggtgacctacaagctgctaaacaactgattatgtctcat
ttgcgcttcgtcgttcacgttgccaaaggctattctggatacggcttaccgcaagctgac
ttgattcaagaaggtaatatcggcttgatgaaagcggttaagcgttttgaccccgatgta
ggggtacgcttggtatcttttgctgtgcattggattaaagcagagattcatgaatatgtg
cttaaaaactggcgcattgttaaggttgctactacaaaagcacagcgtaagttgtttttt
aaccttcgtaaatctaaaaaacgtttaggctggtttagcgataatgaagttggcatggta
gctgaaacccttggggtgtctaagtccgatgtgaccgaaatggaatcacggatggctgcg
caagatccagcgtttgatttggccagcgacaatgatgacgagcaagattatgctccgatg
cattatctggaagatcattcatctgatttagctagccaagttgaaaacgacaactgggag
caaagtaaccaagagcgcctgctgtcagccatcaagacacttgatgagcgtagtcagcac
attcttcaagctcgttggttaaatgaagacaaaacaacgctccaagatctcgcggcaact
taccaagtgtcggctgaacgtattcgacaactcgaaaagaatgcgatgaataaattgaaa
gggcgaatggaagcgtaa
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