Shewanella youngdeokensis: RGE70_02570
Help
Entry
RGE70_02570 CDS
T10660
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
syou Shewanella youngdeokensis
Brite
Enzymes [BR:
syou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RGE70_02570 (srmB)
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
rRNA helicases
RGE70_02570 (srmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WOT05733
LinkDB
All DBs
Position
complement(611994..613220)
Genome browser
AA seq
408 aa
AA seq
DB search
MLFEDLQLDPRLLESLKAMGHNKPTTIQQQTIPVAMEQKDILARAPTGTGKTASFLLPAM
QHLLDFPRRFGGQARILILTPTRELASQIHRYACHLGTGLNFDTCIITGGVPYAAQEEAL
KGNVDILVATPGRLMEYLDKGLFNAEEVEVLVIDEADRMLDMGFSAAVETLAIESVGRKQ
TMLFSATLEGSDVGRFSHQLLTDPTKLEAEAPRSEKAKIHQWVHIADNKEHKFAMLCAIL
KQEEVQRTIVFAKTREAVASLNGLLQKHGITCSFMRGDMEQKARFQALGRFTKGEVNVLL
ATDVAARGIDVDDITHVINFDMPRSADTYVHRIGRTGRAGAKGTAISLVEAHDVRIVGKI
ERYINQPLKRRFVKDLRPKNKEAKPPGKKKNPDSGKTFSKKNKKKKKK
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgctatttgaagatctccaacttgaccctcgtttgttagagtcactaaaagcaatgggc
cacaacaagcccactacgatacaacaacaaacaattccagttgccatggagcaaaaagat
attcttgctcgcgcaccaacaggaaccgggaaaactgcgagcttcctattaccagcaatg
cagcacctgctcgattttccacgtcgattcggtggtcaagcacgcatattaattttgact
ccaacccgagaactggcaagccagattcatcgctacgcttgtcatttaggcacgggctta
aacttcgatacctgcattattactggtggcgttccttacgcggcacaagaagaagcatta
aaaggcaacgtcgacattttagtcgccactccaggccgtttaatggaatatcttgataaa
ggcttattcaatgcagaagaagtcgaagtattagttattgatgaagccgaccgcatgcta
gatatgggtttctcagcggcagttgaaacactggcaattgaatcggttggccgtaaacaa
accatgttgttttcagccacacttgaaggcagcgatgtggggcgtttttcacatcaacta
ttaactgacccgaccaagctcgaagctgaagcacctcgcagtgaaaaagcaaagatccac
caatgggttcatatcgccgacaacaaagagcacaagtttgccatgttgtgcgcgatatta
aagcaagaagaagtacagcgtaccattgtgtttgccaaaacacgtgaagcggttgcaagc
cttaatggtttactacaaaaacacggtatcacttgtagctttatgcgcggtgatatggag
caaaaagcgcgctttcaagccttaggccgcttcactaaaggtgaagttaacgtactactg
gcaacagacgttgccgcccgtggtattgatgttgatgacattacccacgtaattaacttt
gatatgccgcgttcagcagatacctatgttcaccgtattgggcgtactggtcgtgcaggc
gctaaaggtactgcaatttcattagttgaagcgcatgacgtacgcatagtgggtaagatt
gaacgttatatcaaccaaccattgaaacgtcgtttcgtgaaagaccttcgtcctaaaaac
aaagaggccaagcctccagggaagaagaaaaacccagattcaggtaagactttcagcaag
aaaaacaaaaagaagaaaaagaaatag
DBGET
integrated database retrieval system
