Shewanella youngdeokensis: RGE70_02810
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Entry
RGE70_02810 CDS
T10660
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_02810
Enzymes [BR:
syou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
RGE70_02810
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
RGE70_02810
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
WOT05777
UniProt:
A0ABZ0JZQ5
LinkDB
All DBs
Position
complement(663364..664053)
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AA seq
229 aa
AA seq
DB search
MRLDKFMCKSTALTRTAATQCIELAEVSVNGQLITDPKFQVHENNHIIWRGERLVARASR
YIMLHKPLNTLSSNVDGAYPSLLHCIHIDRVEDLHIVGRLDADTSGLVLLTDDGRWSFEI
IRPDKLCPKTYRVTLRDPIADDVAPRFLAGIELQNESQLTAPATLTIVSPKEVLLTITEG
RYHQVKRMFAAVGNRVNGLHREQIGNLQLDVELGQWRNLTAQEVASFIK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgccttgataagtttatgtgcaaaagcaccgcactgacccgtaccgctgccacgcaa
tgtattgagttagccgaagtcagtgttaacggccagctgattactgaccctaaatttcag
gtgcacgaaaataaccacataatctggcgtggtgagcggctagtcgcacgagcatctcgc
tatataatgttgcataagccgctcaatacattgagctctaatgttgatggcgcctaccct
agcttattgcattgcatacatatcgatagagttgaagatttgcatattgtaggccgctta
gatgccgatacgtcagggttagtattgctaacagatgatgggcgctggtcgtttgagatt
attcgccccgataagctatgcccgaaaacgtatcgagtcactttgcgtgatcccattgct
gatgatgttgctccgcggtttttagccgggatagaacttcaaaatgaatcacagctaacc
gccccagcaaccttgactattgtaagccctaaagaggtactactgaccattacagagggg
cgctaccaccaagttaagcgcatgtttgctgcggttggaaaccgcgtcaatggcttacac
cgtgaacaaattggcaacctacaacttgatgtagagctggggcagtggcgcaaccttacc
gcacaagaggtggcaagctttattaaatag
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