Shewanella youngdeokensis: RGE70_03555
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Entry
RGE70_03555 CDS
T10660
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine(1911/1915/1917) synthase RluD
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
syou03009
]
RGE70_03555 (rluD)
Enzymes [BR:
syou01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
RGE70_03555 (rluD)
Ribosome biogenesis [BR:
syou03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RGE70_03555 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF7489
DUF6368
CT47
S4_2
Motif
Other DBs
NCBI-ProteinID:
WOT05916
LinkDB
All DBs
Position
831557..832528
Genome browser
AA seq
323 aa
AA seq
DB search
MTQEINLKSEITSIQTGQRLDQTLADLFPDYSRTRIKEWILSGSVSIDGVVTDKPRTKVL
EGQVIVIGAKLEEETSAKAEAIDLDIVYEDDHILVINKQAGLVVHPGAGNQDGTLMNALL
HHCPGIELVPRAGIVHRLDKDTTGLMVVAKTVEAQKHLVTALQAREITREYEAIVHGGII
AGGTVDEPIDRHPTKRTHMAVVHTGKPAMTHYRVAEKFRLHTRLRLRLESGRTHQIRVHM
AYIGHVLVGDPVYAGRPRPPKGAAPEFFETYMGFRRQALHAIRLELAHPFTCEIMSWQAP
VPDDMVKLTKALRQDTIDNPTVV
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgactcaagagattaatctaaaaagcgagataacatcaatacaaacagggcaaagatta
gaccaaactttggctgatttgttccctgactactcgcgaacacgcattaaagagtggatt
ttatccggctcagtaagtattgacggcgtagtaactgacaaacctagaacaaaagtttta
gaaggtcaggttattgtcattggtgcaaaactggaagaggaaacatctgcaaaggctgaa
gctattgacctagatattgtttatgaggatgaccatattttggttattaataagcaagct
ggtctagttgtgcacccaggagcgggcaaccaagacggtaccttaatgaatgcgttgttg
catcattgcccaggtatcgaattagtgccgcgcgcgggtattgtgcatcgcttggataaa
gacacaacgggtttgatggttgtggctaaaacagtcgaagcgcaaaagcatttagtgaca
gcgctgcaagcccgtgaaattacgcgtgaatatgaagccattgttcatggcggcattatt
gctggtggtactgtcgatgaacctatcgatcgtcacccaactaaacgtacgcacatggcg
gttgtacacacgggtaagcctgcgatgacccattaccgtgtagctgaaaagttcagacta
catacgcgtttacgtcttcgtttggagtccggccgtactcaccaaattcgtgtgcatatg
gcttatattggccacgtactcgtcggtgatcctgtttacgctggtcgtccgcgcccgcct
aaaggtgcagcgcctgagttttttgaaacctatatgggctttagaagacaagcattgcat
gcgatcagacttgaactagcgcatcctttcacctgtgaaattatgagctggcaagcgcca
gtacctgatgacatggtgaaactaacaaaagcgttacgccaagataccatcgataaccct
actgttgtttaa
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integrated database retrieval system
