Shewanella youngdeokensis: RGE70_03565
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Entry
RGE70_03565 CDS
T10660
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
syou Shewanella youngdeokensis
Brite
KEGG Orthology (KO) [BR:
syou00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
syou03110
]
RGE70_03565 (clpB)
Chaperones and folding catalysts [BR:
syou03110
]
Heat shock proteins
HSP100
RGE70_03565 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_24
nSTAND3
AAA_14
IstB_IS21
TniB
AAA_18
RuvB_N
bpMoxR
AAA_7
ATPase_2
DUF815
NBD_SMAX1
AAA_19
SRP54
Torsin
CobU
Phage_T7_tail
Motif
Other DBs
NCBI-ProteinID:
WOT05917
LinkDB
All DBs
Position
833459..836032
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AA seq
857 aa
AA seq
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MRLDRMTNKFQIAISDAQSLALGRDHQFIEPTHLMMALLNQDGGSIHPLLTQAGIQVSHL
RSLLSQALEKLSQVEGTGGDVQLSQPLIRLLNLCDKLAQKRKDKFISSELFILAALEGSD
PLAQALKKAGATKALMESTIDQVRNGQNVDDPNAEDQRQALKKYTVDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINNEVPEGIKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLNELYQEDGQVILFIDELHTMVGAGKGDGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPNVEDTIAILRGLKERYELH
HHVEITDPAIVAAASMSHRYISDRKLPDKAIDLIDEAASSIRIQIDSKPESLDKLERRAI
QLKLEEQAVRKEEDEASLRRLEVLRTELKVVETKAAELNEIWRTEKAALAGTQHIKADLE
QARMDLEVARRAGDLTRMSELQYGRIPALEKQLDLAAQAEMQDMALLRNKVTDVEIAEVL
SKATGIPVSKMLEGEREKLLQMEDALHERVIGQHEAVNSVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELCKSLAHFLFDTESSLVRIDMSEFMEKHSVARLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDVIQSGFGAQEYEDMKSDVMQVVTQHFRPEFLNRVDESVVFHPLDKSNIAHIASIQID
ALRQRLAEKDYELEISTEALAVIADAGYDPIYGARPLKRALQNVVENPLAQLILGGQLKS
GMAIKITEEAGQLNFSQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatagaatgaccaataaattccaaatcgctatttcagatgctcaatctttg
gcgttaggacgagaccatcaatttatagagcctactcacttgatgatggcgttattgaat
caagatgggggatccattcatccgttgttgactcaagcaggtattcaagtcagccatctt
cgctcgctactgagtcaagcgcttgaaaaattatcacaggtagaaggtacaggcggcgac
gtacaattgtctcagccgttgatccgcttgcttaatttatgcgataaattagcgcaaaag
cgaaaagataaatttatttcaagtgagttatttatattagcggcacttgaaggtagcgat
ccactcgcgcaagcgttaaaaaaggctggtgcaacaaaagccttaatggaatcgacaatt
gaccaggttagaaatggtcaaaatgttgatgatcctaatgccgaagatcagcgccaagcg
ttaaaaaaatatactgttgaccttactgagcgtgcagagcaaggcaaattagacccggta
attggtcgggatgatgagatccgacgtaccattcaagtattgcagcgtcgcagtaaaaat
aaccccgtattaattggtgagccaggcgttggtaaaaccgcgattgttgaaggtttagcc
cagcggattattaacaatgaagtacctgaaggcattaaaaataagcgagtgttgtcttta
gatatgggcgcattaatagcaggtgctaaataccgcggcgagttcgaagagcgtctaaaa
gcggtactcaatgagctttatcaagaagatgggcaagtgattctatttattgatgagctg
cacaccatggttggcgccggtaaaggcgatggcgcaatggatgcaggcaatatgctcaaa
ccggcattagcccgtggcgatcttcactgtgttggtgccacaacgcttgatgaataccgg
cagtatattgaaaaagatgctgcattagagcgtcgttttcaaaaagtattggtggatgaa
cccaatgttgaagacaccattgcaattttacgtggcctaaaagagcgatatgaactgcat
catcatgtggaaattaccgatccggccatagttgcagcagcaagtatgtctcatcgttat
atatctgatcggaaactacccgataaagcgatcgatttgatagatgaagcggcatcaagt
atcagaattcaaatcgactcaaaaccagaatctcttgataaacttgaacgtcgcgcgatt
cagttaaagctggaagagcaagctgtacgtaaagaagaagatgaagcgagtttacgccgt
ttagaagtattacgaacagagttaaaagttgttgagaccaaagcggcagaactcaatgaa
atttggcgtactgaaaaggcagcccttgcaggcactcaacatattaaagcggatcttgaa
caagcgcggatggatcttgaggtcgcaaggcgagcgggtgacttgacgcgaatgtctgag
ctgcaatatggccgcattccagcgcttgaaaagcaactcgatttagcagctcaagccgaa
atgcaagatatggccttattacgtaataaagtcactgatgtcgaaatcgctgaagtgctg
tctaaagcgaccggcattccggtttcaaaaatgctagaaggtgagcgagaaaagctgctg
cagatggaagatgcattacacgaacgggtgattggtcaacacgaagctgtaaattcagtg
gccaacgccattcgtcgaagtcgagctgggcttgcagatcctaatcgacctattggttca
ttcttattcttagggcctacaggagtgggtaaaacagagctttgtaaatcacttgctcat
tttctgtttgataccgaatcttctttagttcgaattgatatgtcagaatttatggaaaag
cattcggtagcacgactcgtcggtgcacctcctggatacgttggatatgaagagggcgga
tacttaaccgaagccgtcaggcgtaagccctattcagtcattttactcgacgaggtagaa
aaagcccatccagatgtatttaatatactattacaagtattagatgatggtcgccttacc
gacggccaaggtcgtactgtcgattttagaaatacagtggtgatcatgacatcaaactta
ggttctgatgttatccagtcaggatttggtgctcaagaatatgaggatatgaagtctgat
gtgatgcaagtggtgacacagcactttagacccgagttcttaaatcgtgtagatgagtct
gttgtttttcatcctttggataaaagtaatatcgcgcacattgcctcaatccaaattgat
gcgttgcgacaacgattagccgagaaagactacgagctagagattagtactgaagcgtta
gctgtaatagccgatgctggctacgatccgatatatggcgcaaggcccttaaaacgagca
ctgcagaacgtagttgaaaacccactggcgcaactgattctaggtgggcagctaaaatca
gggatggcaatcaaaattactgaagaggctggccagcttaactttagtcaatga
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